Gene
| Gene Model ID | habu1_s3726_g12539 |
|---|---|
| Locus | habu1_scaffold3726 : 411776 ... 423647 : + |
| To GenomeBrowser | habu1_scaffold3726:411776..423647 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atpase family aaa domain-containing protein 3a isoform x1 | GO:0000166 GO:0005739 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12539.t1 | 1 | 1 | DUF3523 | 34 | 287 | 0.0 | 329.0 | 0.0 | 0.0 | 327.9 |
| habu1_s3726_g12539.t1 | 1 | 1 | AAA | 349 | 475 | 2.7e-21 | 76.1 | 9.2e-24 | 7.2e-21 | 74.7 |
| habu1_s3726_g12539.t1 | 1 | 1 | AAA_17 | 349 | 500 | 3.5e-07 | 31.0 | 1.9e-09 | 1.5e-06 | 29.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12539.t1 | gi|641759229|ref|XP_008165511.1| | PREDICTED: ATPase family AAA domain-containing protein 3-like isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3726_g12539.t1 | gi|471405120|ref|XP_004384519.1| | 0.0 | |
| habu1_s3726_g12539.t1 | gi|634861278|ref|XP_007943702.1| | PREDICTED: ATPase family AAA domain-containing protein 3A [Orycteropus afer afer] | 0.0 |
| habu1_s3726_g12539.t1 | gi|585659336|ref|XP_006886000.1| | PREDICTED: ATPase family AAA domain-containing protein 3-like [Elephantulus edwardii] | 0.0 |
| habu1_s3726_g12539.t1 | gi|47498020|ref|NP_998849.1| | ATPase family AAA domain-containing protein 3 [Xenopus (Silurana) tropicalis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.6 |
| Venom grand-1 | 7.6 |
| Pit, infrared sensing | 7.6 |
| Nose | 7.0 |
| Brain-1 | 2.6 |
| Eye | 4.4 |
| fetal fibroblast | 35.1 |
| venom gland-2 | 18.9 |
| Brain-2 | 2.8 |
| Spleen | 4.9 |
| Lung | 1.8 |
| Liver | 6.3 |
| Kidney | 5.2 |
| Pancreas | 5.9 |
| Small intestine | 5.0 |
| Large intestine | 4.2 |
| Stomach | 4.3 |
| heart | 5.5 |
| ovary | 20.9 |
| cheek muscle | 4.3 |
Transcript
| Transcript ID | habu1_s3726_g12539.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12539.t1 ccggttgggctgcgcctgtgagggaacatgtcgtggctcttcgggctgaaccgcggtggcggcggcggcggggacgcggg ccccggagccgggctacctccgctgccgcctccgcccggcgggggaccgaaagaggggacgggcgaggggagccgcccca aggacaaatggagcaacttcgatcccaccggcctggagcgcgctgccaaggccgcccgagagctcgacgcttcccgacac gccaaagaggccctaggcttagctcagctacaggaacagacactacagctggagcagcagtctaaattaaaggaatacga agctgccgtagaacagttgaagaacgaacaagtccggatacaagcagaagagaggagaaaaacccttaatgaagagacaa ggcaacaacaagcgagagcccagtaccaggacaaattagctcggcaacgttacgaggaccagttacgacagcagcaactc cttaacgaagagaatttaaggaagcaagaagaatcggttcagaagcaggaagccatgaggagagcgacggtggagcgtga gatggaactgcgacataagaacgagatgctgcggatcgaggcggaagcccaggctcgcgccagggcggagcgagagaacg cggatctcatccgggaacaaatccggctaaaagccgccgagcaccgccagacggtgttggattccctcaagacagctggg actcttttgggggaaggtttccgtgcctttgttactgactgggataaagtaacagccacggtggcagggctgagtctgct ggccgttggcatctacagtgccaaaaacgccaccggcgtggccgggcggtatatcgaagctcgactgggcaagccctcgt tggtgcgggaaacctcccgaatcaccctcctcgaagcgttcaagcaccccatccaggttgggaggcgactgaccagcaag gcccaggatgctctggaaggggtcgtcctcaatccaaagctggaggagcgggtgcgagacatagccattgcgacccggaa cacaaggaataacagaagcctgtatcggaatatcctcatgtatggacccccggggacaggaaagaccctttttgccaaga aattagccatgcattctggcatggattatgccatcatgacgggtggcgatgtcgcccctatggggcgtgaaggcgtgact gccatgcacaaggtctttgactgggccaacacaagccggagaggcctcttgctgtttgtggatgaagctgatgcattcct gcggaaaagagcaacggaaaaaatcagtgaggacctacgagcgacgctcaacgctttccttcataggacaggacagcaca gcagcaagttcatgctggttttagcgagcaaccagccggaacagtttgattgggccatcaacgaccggattgatgagatg gtccactttcagctgccacgtttagaagagcgggagagattggtccgaatgtacttcgacaagcacattctccagccggc caccgagggcagacagcgcttaaaactggcccagtttgattacggggaaaaatgctcggaaattgccaagctgacggaag gcatgtctgggcgggagatctcgcagctcgcggtggcttggcaggctgcagcctacgcctcggaggatggtgtcctgaca gaagccatgattgatactcgagtagcagatgcggttcagcagcacagacagaagatggagtggctaaaagccgaaggcat ggaggcaggcaagagccaaccgctgccacttacgctggggaaggctgcatgaagagcctccgaaagggggctgagagaga tcccagacctttgggtgggtttcagagatgaggggaaggccttgtgccgctggaatcatgccgaggagagaatcgaaagc cccgcttcttgaaggaggccggggttctgagttcaggaaccatttccttgattttttttaaaaaaagtggactcctggaa taattatgagcaaatgggtctgtatcacacaaaacaatatattaaaagataattcctttgccaaaggt |
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Protein
| Protein ID | habu1_s3726_g12539.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12539.t1 MSWLFGLNRGGGGGGDAGPGAGLPPLPPPPGGGPKEGTGEGSRPKDKWSNFDPTGLERAAKAARELDASRHAKEALGLAQ LQEQTLQLEQQSKLKEYEAAVEQLKNEQVRIQAEERRKTLNEETRQQQARAQYQDKLARQRYEDQLRQQQLLNEENLRKQ EESVQKQEAMRRATVEREMELRHKNEMLRIEAEAQARARAERENADLIREQIRLKAAEHRQTVLDSLKTAGTLLGEGFRA FVTDWDKVTATVAGLSLLAVGIYSAKNATGVAGRYIEARLGKPSLVRETSRITLLEAFKHPIQVGRRLTSKAQDALEGVV LNPKLEERVRDIAIATRNTRNNRSLYRNILMYGPPGTGKTLFAKKLAMHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWA NTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVHFQLPRLE ERERLVRMYFDKHILQPATEGRQRLKLAQFDYGEKCSEIAKLTEGMSGREISQLAVAWQAAAYASEDGVLTEAMIDTRVA DAVQQHRQKMEWLKAEGMEAGKSQPLPLTLGKAA |
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