Gene
| Gene Model ID | habu1_s3726_g12540 |
|---|---|
| Locus | habu1_scaffold3726 : 426947 ... 436396 : - |
| To GenomeBrowser | habu1_scaffold3726:426947..436396 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 240 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12540.t1 | 1 | 1 | TMEM240 | 1 | 118 | 0.0 | 198.7 | 0.0 | 0.0 | 198.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12540.t1 | gi|602646973|ref|XP_007429916.1| | PREDICTED: transmembrane protein 240 [Python bivittatus] | 0.0 |
| habu1_s3726_g12540.t1 | gi|700385447|ref|XP_009932766.1| | PREDICTED: transmembrane protein 240 [Opisthocomus hoazin] | 0.0 |
| habu1_s3726_g12540.t1 | gi|701408593|ref|XP_009970695.1| | PREDICTED: transmembrane protein 240 [Tyto alba] | 0.0 |
| habu1_s3726_g12540.t1 | gi|637378770|ref|XP_003230600.2| | PREDICTED: transmembrane protein 240 [Anolis carolinensis] | 0.0 |
| habu1_s3726_g12540.t1 | gi|527250752|ref|XP_005143684.1| | PREDICTED: transmembrane protein 240 [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 3.9 |
| Brain-1 | 43.5 |
| Eye | 5.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 31.2 |
| Spleen | 0.3 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.4 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3726_g12540.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12540.t1 gcatcacattcattatgtcatcccgtacgatggagaccagtcggtggttgattcttccgagaactactttgtgactgaca acgtcaccaagcaagaaattgatctgatgctgggactcttgttgggattctgtataagctggtttcttgtgtggatggac ggattgctccattatgccgtacgagcatggcggacgagccgacggtatgacaattcatggtcttggtttcccaaattttg taacttcaaggagttccggaaacgccatcacagccaatatgacgaagccgcgggaaacatggtgcacatcaaacagaaat tgtatcataatgggcaccccagcccaagacacctttaaagaaacccgggactgatcggtggtctactgaacatgcctttt gctgtctaccaaggggagatgtccagctgcttactccctggtggacgccacgtaaagacaccctcttagttccaccaaca gtgtgtctgcagaattctctgcgcccagagaatgcacaatttcccccctgtcctggatccaaggcttgcgagacattgca ctgtggttaccatttgactggtggacctgtacatatgacgaaacgagacaaacaacccagcacagaaagagcccacgaga aaatttgcattacactttcaagccctcgcttcttttggtgatgatagcaacggcagtatctttttctccccgttggtttt ccttgttgatttggaagttttgtcgtcgtccaaggtctttgtagatgaatttggccagatgttgccctgtttagccttca agtacttctgaatctctgtttccaattgtatctgaccctcccatccacttgatccctattaaggttctttgctgtgctcc gagatcccctttctaatctagatttggtttggagtttagatgacccgatacttggtatagatgccatctgaatcggttcg ttaaagagtggagtaaagatgacaagctgtagaactaattaaatcggttaagtttaaattgctag |
|
Protein
| Protein ID | habu1_s3726_g12540.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12540.t1 HHIHYVIPYDGDQSVVDSSENYFVTDNVTKQEIDLMLGLLLGFCISWFLVWMDGLLHYAVRAWRTSRRYDNSWSWFPKFC NFKEFRKRHHSQYDEAAGNMVHIKQKLYHNGHPSPRHL |
|