Gene
| Gene Model ID | habu1_s37466_g23177 |
|---|---|
| Locus | habu1_scaffold37466 : 26690 ... 49095 : - |
| To GenomeBrowser | habu1_scaffold37466:26690..49095 |
| Genes list of scaffold | habu1_scaffold37466 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s37466_g23177.t1 | 3 | 1 | Mito_carr | 6 | 99 | 0.0 | 234.5 | 1.6e-26 | 1.2e-22 | 79.4 |
| habu1_s37466_g23177.t1 | 3 | 2 | Mito_carr | 104 | 190 | 0.0 | 234.5 | 5.8e-23 | 4.3e-19 | 68.0 |
| habu1_s37466_g23177.t1 | 3 | 3 | Mito_carr | 199 | 289 | 0.0 | 234.5 | 5.5e-28 | 4.1e-24 | 84.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s37466_g23177.t1 | gi|602661795|ref|XP_007436545.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X3 [Python bivittatus] | 0.0 |
| habu1_s37466_g23177.t1 | gi|602661793|ref|XP_007436544.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s37466_g23177.t1 | gi|602661791|ref|XP_007436543.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s37466_g23177.t1 | gi|557319754|ref|XP_006033033.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s37466_g23177.t1 | gi|557319756|ref|XP_006033034.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.1 |
| Venom grand-1 | 2.5 |
| Pit, infrared sensing | 2.9 |
| Nose | 3.3 |
| Brain-1 | 3.3 |
| Eye | 3.1 |
| fetal fibroblast | 13.2 |
| venom gland-2 | 4.4 |
| Brain-2 | 2.3 |
| Spleen | 1.1 |
| Lung | 2.1 |
| Liver | 3.4 |
| Kidney | 3.6 |
| Pancreas | 3.3 |
| Small intestine | 1.9 |
| Large intestine | 2.7 |
| Stomach | 4.1 |
| heart | 4.4 |
| ovary | 12.3 |
| cheek muscle | 5.2 |
Transcript
| Transcript ID | habu1_s37466_g23177.t1 |
|---|---|
| Definition | - |
>habu1_s37466_g23177.t1 ccccgccgtcgccgacctctttcccgggccctagaagcaagaagggggtagtctcatctgactgatctttcccagaaaag ctggatttttacaggctctccaaaaatatcatcatgatcggataggaggaactttgggagagggaagagacacggaggag catggcggcgttgaactggaagccgtttgtgtacggaggtctggcttccatcactgcagaatgtggtactttcccaattg atctgacaaaaacgcgcctgcaggtacaaggtcaaaaaaatgatgtgaagcataaagaaattcgttatcgtgggatggtt cacgctttagtgaaaatattcagggaagaaggattgaaggccttatactctggcatcgccccggctatgttacgccaggc ttcttacggaaccatcaaaataggcacttaccagagcttgaaaagaatatttatcgaacggccagaagatgaaacgttgg ctgtcagtgtattctgtggggtcctgtctggggtcatctcatcttccattgctaaccccactgacgtcctgaagatccgg atgcaaattcaaggaagcctcgtagctggtggaatgcttgggaacttcatgaatatttatcagaaggaaggcacccgagg cttgtggaagggagtctcacttaccgctcagagagcagcggtggtggttggcgtggagctgcccgtttatgaccttacca aaaagcatatcatcctcagtggctacatgggagacacggtgtacactcacctgctggccagctttacctgcggcttggcg ggagcgctggcatccaaccccatcgatgtggtgaggacgcggatgatgaaccagagaaccgtacgaaccgggccccagcc cggctacaagggaactctagactgcttgcttcagacctggaagaacgaaggttttttcgccttgtacaaaggattctggc ccaactggttaaggcttgggccttggaacatcattttctttgtgacttatgaacagctgaagaaattggatttctgacag cctgaaaattgaagaggccagttcttccgtcggtgatcttaaccctcaagtgctcttttccggtattcaagcgtgcagaa ttgatgaaattaaattgttggtgcaaacaacgttga |
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Protein
| Protein ID | habu1_s37466_g23177.t1 |
|---|---|
| Definition | - |
>habu1_s37466_g23177.t1 MAALNWKPFVYGGLASITAECGTFPIDLTKTRLQVQGQKNDVKHKEIRYRGMVHALVKIFREEGLKALYSGIAPAMLRQA SYGTIKIGTYQSLKRIFIERPEDETLAVSVFCGVLSGVISSSIANPTDVLKIRMQIQGSLVAGGMLGNFMNIYQKEGTRG LWKGVSLTAQRAAVVVGVELPVYDLTKKHIILSGYMGDTVYTHLLASFTCGLAGALASNPIDVVRTRMMNQRTVRTGPQP GYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKLDF |
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