Gene
| Gene Model ID | habu1_s37466_g23178 |
|---|---|
| Locus | habu1_scaffold37466 : 49276 ... 60172 : + |
| To GenomeBrowser | habu1_scaffold37466:49276..60172 |
| Genes list of scaffold | habu1_scaffold37466 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| growth-related translationally controlled tumor protein | GO:0005509 GO:0005615 GO:0005654 GO:0005667 GO:0005771 GO:0008134 GO:0009615 GO:0019827 GO:0044822 GO:0045298 GO:0070062 GO:1902230 GO:2000384 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s37466_g23178.t1 | 1 | 1 | TCTP | 1 | 168 | 0.0 | 241.5 | 0.0 | 0.0 | 241.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s37466_g23178.t1 | gi|729768992|ref|XP_010581711.1| | PREDICTED: translationally-controlled tumor protein [Haliaeetus leucocephalus] | 0.0 |
| habu1_s37466_g23178.t1 | gi|45382329|ref|NP_990729.1| | translationally-controlled tumor protein homolog [Gallus gallus] | 0.0 |
| habu1_s37466_g23178.t1 | gi|350535835|ref|NP_001232216.1| | translationally-controlled tumor protein [Taeniopygia guttata] | 0.0 |
| habu1_s37466_g23178.t1 | gi|564232743|ref|XP_006260747.1| | PREDICTED: translationally-controlled tumor protein homolog [Alligator mississippiensis] | 0.0 |
| habu1_s37466_g23178.t1 | gi|637347689|ref|XP_003226667.2| | PREDICTED: translationally-controlled tumor protein [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1109.6 |
| Venom grand-1 | 3479.5 |
| Pit, infrared sensing | 1773.9 |
| Nose | 1102.5 |
| Brain-1 | 330.0 |
| Eye | 1165.7 |
| fetal fibroblast | 2005.2 |
| venom gland-2 | 2214.2 |
| Brain-2 | 248.3 |
| Spleen | 1762.4 |
| Lung | 1736.7 |
| Liver | 4014.2 |
| Kidney | 2849.7 |
| Pancreas | 2103.8 |
| Small intestine | 2817.9 |
| Large intestine | 1852.7 |
| Stomach | 2087.7 |
| heart | 1702.4 |
| ovary | 485.9 |
| cheek muscle | 3481.0 |
Transcript
| Transcript ID | habu1_s37466_g23178.t1 |
|---|---|
| Definition | - |
>habu1_s37466_g23178.t1 gccggcctgccgccgccgcccgcccgcccgccgcctcagccatgatcatctaccgcgactgcatcagccaagatgagatg ttctcggatatctacaaaatcacagaagttgccaacggcctctgcctggaagtggaagggaagatggtcagccggaaaga gggcgaaattgacgatgctctgattggtggaaacgcgtccgccgaaggccccgagggagacggcacagaggccaccgtca tcaccggggttgacatcgtcatgaaccaccacctccaggagacctctttcaccaaggaatcttacaaaaagtacatcaag gactacatgaagtcaatcaaagccagacttgaggaaactaagccagagagagtaaagccttttatgaccggggcagctga gcaagtcaagcacatcttgggaaacttcaaaaattatcaattttttgtaggagagaacatgaatccggacggcatggtgg ggctactggacttccgcgaagatggcgtgaccccctatatgattttctttaaggatggattagagatggaaaaatgctaa caagaaacccaatcattccgaatcattttgtcatcataattggctgctgctctttattcatcatccaacaaaacaaaaaa catcatgactcaacaaatgtctgcaaacctggacttgatttcatcttgagcttaatttgatttattttgaatccccccct gaattaattggaagtggaggcatttggggttttttttcttttgggttttttttttttaaaaaaaaggagaaaaaaaaact tgtcttgtaggctgtctaaaataaaaaaaaaaaactcatttaaaccc |
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Protein
| Protein ID | habu1_s37466_g23178.t1 |
|---|---|
| Definition | - |
>habu1_s37466_g23178.t1 MIIYRDCISQDEMFSDIYKITEVANGLCLEVEGKMVSRKEGEIDDALIGGNASAEGPEGDGTEATVITGVDIVMNHHLQE TSFTKESYKKYIKDYMKSIKARLEETKPERVKPFMTGAAEQVKHILGNFKNYQFFVGENMNPDGMVGLLDFREDGVTPYM IFFKDGLEMEKC |
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