Gene
| Gene Model ID | habu1_s37466_g23179 |
|---|---|
| Locus | habu1_scaffold37466 : 66019 ... 84075 : - |
| To GenomeBrowser | habu1_scaffold37466:66019..84075 |
| Genes list of scaffold | habu1_scaffold37466 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| general transcription factor iif subunit partial | GO:0005524 GO:0005674 GO:0006367 GO:0008026 GO:0015630 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s37466_g23179.t1 | 1 | 1 | TFIIF_beta | 7 | 87 | 6.9e-27 | 94.9 | 5.9e-31 | 8.7e-27 | 94.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s37466_g23179.t1 | gi|637347685|ref|XP_008117717.1| | PREDICTED: general transcription factor IIF subunit 2 [Anolis carolinensis] | 0.0 |
| habu1_s37466_g23179.t1 | gi|719759350|ref|XP_010215810.1| | PREDICTED: general transcription factor IIF subunit 2, partial [Tinamus guttatus] | 0.0 |
| habu1_s37466_g23179.t1 | gi|697013737|ref|XP_009580518.1| | PREDICTED: general transcription factor IIF subunit 2, partial [Fulmarus glacialis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.2 |
| Venom grand-1 | 4.4 |
| Pit, infrared sensing | 3.1 |
| Nose | 2.1 |
| Brain-1 | 1.8 |
| Eye | 2.5 |
| fetal fibroblast | 4.4 |
| venom gland-2 | 3.9 |
| Brain-2 | 2.5 |
| Spleen | 2.0 |
| Lung | 2.4 |
| Liver | 1.0 |
| Kidney | 3.1 |
| Pancreas | 3.7 |
| Small intestine | 1.8 |
| Large intestine | 2.0 |
| Stomach | 2.0 |
| heart | 4.7 |
| ovary | 3.1 |
| cheek muscle | 11.2 |
Transcript
| Transcript ID | habu1_s37466_g23179.t1 |
|---|---|
| Definition | - |
>habu1_s37466_g23179.t1 atggtccactgccccatcttttggggaaaaacggtcgcaagtcctttttttcagagctgtcgtaactttgaatggtcatt aaagcgacgcttcagatagaagaatcctcaaagcccgtcagctggacgatgcagctggataaggcggtcaccaccaatta caagcccgtggccaatcatcagtacaacatcgagtacgacaagaagaaaaaagaggacggcaagcgggcccgagctgaga agcagcaggtgttggacatgctcttctctgcttttgagaaacaccagtattacaatattaaagacctggtggatataact aaacagcccgtgtgggcctacacctcctttgtttctctttggagacgttttgcttctcatccaagaagcttcttcagctc tgactggatggtgggagaagggaaggattcagggagagctatccagtcagagctgaagaatcttcttggatgagaagcga aacgtcttcaaagaaaaacaagaaagtccagttgcctcctgaaaaaaaaaaaaacacctttaggaaaaccatgacttgga tgacgaagaagctccacaacacatttggctgtagtattattatttatccttttttattatcttctttacttctccctttt attggtcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct tcttnnnnnnnnnnnnnnnnnnnnnnnnnnnctctgttgttttgcaagtaagcggaagcaagctgctgtaaccggagaca aattcatggtgtgtctaatcgcacttggacaaataaaagattcaattcaatccagtcca |
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Protein
| Protein ID | habu1_s37466_g23179.t1 |
|---|---|
| Definition | - |
>habu1_s37466_g23179.t1 MVIKATLQIEESSKPVSWTMQLDKAVTTNYKPVANHQYNIEYDKKKKEDGKRARAEKQQVLDMLFSAFEKHQYYNIKDLV DITKQPVWAYTSFVSLWRRFASHPRSFFSSDWMVGEGKDSGRAIQSELKNLLG |
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