Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3775_g12672
Locus habu1_scaffold3775 : 172864 ... 192125 : -
To GenomeBrowser habu1_scaffold3775:172864..192125
Genes list of scaffold habu1_scaffold3775

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.8
Venom grand-1 6.9
Pit, infrared sensing 3.3
Nose 3.6
Brain-1 0.7
Eye 2.2
fetal fibroblast 6.0
venom gland-2 4.6
Brain-2 1.9
Spleen 3.8
Lung 2.8
Liver 6.8
Kidney 4.4
Pancreas 6.4
Small intestine 8.4
Large intestine 7.9
Stomach 7.9
heart 8.0
ovary 24.3
cheek muscle 24.7

Transcript
Transcript IDhabu1_s3775_g12672.t1
Definition-
>habu1_s3775_g12672.t1
ggggtcacgtgatctaaatccagacacttggcaactgactcgtacttacgacggtttgcagtgtcccagggatatgtgtg
tcacgtgatccccttttgcgatcttccgacaaagtcaatggggaagtcagattcgcttaacaaccgtgtgactaaacgac
tgcagtggctggattgagacccaagggagaagaagaagcaagaagaccgggtgctgagttcgaaagcagaaatatttgcg
gagagcggggggggtgagggcgccaggagagattcgaagccacacggccagcagttggtgcttaggagaagttgcagcag
gagccaaggtgagtttctggggccgcaccatcggaggaaaggaagagggggtgaaaaacggcacccctttttccgagtga
gctggggggttccccttggcatcaccacagccgccgtggccttgaaaaaaatcggttacgacgcgtcagatgtctcggtg
ggctggtgctggattgacatcaacgcagaggaccggctgctttggatgctgctggcggggaaattgtgggaaatccttgc
ttacgtgaccttgccggttttttacgtcctgataaagaagcacatcaaccgagcgcacgcagccctctccgagtatcggc
ccatcttgtccagggccccatcttcccacccaggagcagcatccgtggcagacaagaagctgaccttaatcccgattatt
ttcatctttctgcgtgtctggagcaccatccggtttgtgctgaccctgtccggctctcctgcagaccaaaactggctcct
ggtggtgcttcacggaatcggaaacacttttcaaggagctgcaaattgcattctctttgtcttttgcacccgagtcgtcc
ggaacaaactgttttcttccttgtgctgctggcgatactcgaatccagagccgcctccgccgagtttggagaccagcttc
caggctgaggctcccctttgcaaagactgggagctgcgaggcagcaatagcacaggggcagacgcatccagcccttgaac
gtggcctgtatcgtgatggaaatcacccttttgcctggtgggattctcaccgaaaccaagatgcctatcacgaataatat
ccatttccctggagaaggaaaacaacaacaacataataagacttttggacttcttttatagaaaaaagaaaaacgttcaa
tttttcaccataacgacggctggatcggtcttactccaaattaactttctcagggtgtggttgttgttgttttttctcct
ttttttttaaaagacgctacgaagacatgtttttatttttttaactcggccgttaagaataaaagaggaaaaagtgttga
attaaatgttaagggacaagatgacccacgtttaaggggcagagaagaggcgtggctgtcaacgccctatttggaaatca
gagaagagaaagagagagagacactacaagtcccctcatcctcaactagcctgatcagggatggatgttggagtcaagca
gctgcctacaaatttcttcttgaaacgaagcatccaaggcggatacttgaaggtggtatagtcttcccatctggaaggac
tgtaacagggtgcatattggttcatttctattttatcgcaagccacttaagaaagtgatggattctcacatgtctggttc
cagtggacacccccaattttgggggacgctgcttcgtttgccttcgaataaatgctgcaaaattttttttttgggccagg
ctgatttttttcccccctcggtctgtatacctcacttctctctgcgtgtttgtgtgtttttaaacaccgatgcaacagaa
actcttaaatgtacagattaagattgaattttccatccgcctcgtcgaaggtggcctttgaacaaaaagtgtgtgttttt
ttttaaaaaaataaacgagccttgaatagatggagctttttttctttctttgactttcccccccccgctttaattttttt
ttcttccagcagttcaatttagagaaaacggcaaagctgcttcaaaagtgtgtctgagtgcgtaagtgttgatgcgtgaa
agattttcacgctttcgcttttggttgtttgctaagtttttaaaacgattttcacaaccttcttgtatttaagtaacaat
ttttccctgggtaacacgtgatttcttggttttgactcccattgggaaggtctgcccctgaggcaaattccttacgtgct
caatcacacttgcccgaataaagtattcagtcaattaattcaac
Transcript IDhabu1_s3775_g12672.t2
Definition-
>habu1_s3775_g12672.t2
ggggtcacgtgatctaaatccagacacttggcaactgactcgtacttacgacggtttgcagtgtcccagggatatgtgtg
tcacgtgatccccttttgcgatcttccgacaaagtcaatggggaagtcagattcgcttaacaaccgtgtgactaaacgac
tgcagtggctggattgagacccaagggagaagaagaagcaagaagaccgggtgctgagttcgaaagcagaaatatttgcg
gagagcggggggggtgagggcgccaggagagattcgaagccacacggccagcagttggtgcttaggagaagttgcagcag
gagccaaggtgagtttctggggccgcaccatcggaggaaaggaagagggggtgaaaaacggcacccctttttccgagtga
gctggggggttccccttggcatcaccacagccgccgtggccttgaaaaaaatcggttacgacgcgtcagatgtctcggtg
ggctggtgctggattgacatcaacgcagaggaccggctgctttggatgctgctggcggggaaattgtgggaaatccttgc
ttacgtgaccttgccggttttttacgtcctgataaagaagcacatcaaccgagcgcacgcagccctctccgagtatcggc
ccatcttgtccagggccccatcttcccacccaggagcagcatccgtggcagacaagaagctgaccttaatcccgattatt
ttcatctttctgcgtgtctggagcaccatccggtttgtgctgaccctgtccggctctcctgcagaccaaaactggctcct
ggtggtgcttcacggaatcggaaacacttttcaaggagctgcaaattgcattctctttgtcttttgcacccgagtcgtcc
ggaacaaactgttttcttccttgtgctgctggcgatactcgaatccagagccgcctccgccgagtttggagaccagcttc
caggctgaggctcccctttgcaaagactgggagctgcgaggcagcaatagcacaggggcagacgcatccagcccttgaac
gtggcctgtatcgtgatggaaatcacccttttgcctggtgggattctcaccgtgagtgtttctagtttgcccacattttg
caaggaaaccaagatgcctatcacgaataatatccatttccctggagaaggaaaacaacaacaacataataagacttttg
gacttcttttatagaaaaaagaaaaacgttcaatttttcaccataacgacggctggatcggtcttactccaaattaactt
tctcagggtgtggttgttgttgttttttctcctttttttttaaaagacgctacgaagacatgtttttatttttttaactc
ggccgttaagaataaaagaggaaaaagtgttgaattaaatgttaagggacaagatgacccacgtttaaggggcagagaag
aggcgtggctgtcaacgccctatttggaaatcagagaagagaaagagagagagacactacaagtcccctcatcctcaact
agcctgatcagggatggatgttggagtcaagcagctgcctacaaatttcttcttgaaacgaagcatccaaggcggatact
tgaaggtggtatagtcttcccatctggaaggactgtaacagggtgcatattggttcatttctattttatcgcaagccact
taagaaagtgatggattctcacatgtctggttccagtggacacccccaattttgggggacgctgcttcgtttgccttcga
ataaatgctgcaaaattttttttttgggccaggctgatttttttcccccctcggtctgtatacctcacttctctctgcgt
gtttgtgtgtttttaaacaccgatgcaacagaaactcttaaatgtacagattaagattgaattttccatccgcctcgtcg
aaggtggcctttgaacaaaaagtgtgtgtttttttttaaaaaaataaacgagccttgaatagatggagctttttttcttt
ctttgactttcccccccccgctttaatttttttttcttccagcagttcaatttagagaaaacggcaaagctgcttcaaaa
gtgtgtctgagtgcgtaagtgttgatgcgtgaaagattttcacgctttcgcttttggttgtttgctaagtttttaaaacg
attttcacaaccttcttgtatttaagtaacaatttttccctgggtaacacgtgatttcttggttttgactcccattggga
aggtctgcccctgaggcaaattccttacgtgctcaatcacacttgcccgaataaagtattcagtcaattaattcaac

Protein
Protein IDhabu1_s3775_g12672.t1
Definition-
>habu1_s3775_g12672.t1
MGKSDSLNNRVTKRLQWLDXDPREKKKQEDRVLSSKAEIFAESGGGEGARRDSKPHGQQLVLRRSCSRSQGEFLGPHHRR
KGRGGEKRHPFFRVSWGVPLGITTAAVALKKIGYDASDVSVGWCWIDINAEDRLLWMLLAGKLWEILAYVTLPVFYVLIK
KHINRAHAALSEYRPILSRAPSSHPGAASVADKKLTLIPIIFIFLRVWSTIRFVLTLSGSPADQNWLLVVLHGIGNTFQG
AANCILFVFCTRVVRNKLFSSLCCWRYSNPEPPPPSLETSFQAEAPLCKDWELRGSNSTGADASSP
Protein IDhabu1_s3775_g12672.t2
Definition-
>habu1_s3775_g12672.t2
MGKSDSLNNRVTKRLQWLDXDPREKKKQEDRVLSSKAEIFAESGGGEGARRDSKPHGQQLVLRRSCSRSQGEFLGPHHRR
KGRGGEKRHPFFRVSWGVPLGITTAAVALKKIGYDASDVSVGWCWIDINAEDRLLWMLLAGKLWEILAYVTLPVFYVLIK
KHINRAHAALSEYRPILSRAPSSHPGAASVADKKLTLIPIIFIFLRVWSTIRFVLTLSGSPADQNWLLVVLHGIGNTFQG
AANCILFVFCTRVVRNKLFSSLCCWRYSNPEPPPPSLETSFQAEAPLCKDWELRGSNSTGADASSP

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Okinawa Institute of Science and Technology
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