Gene
| Gene Model ID | habu1_s3775_g12673 |
|---|---|
| Locus | habu1_scaffold3775 : 201426 ... 206490 : + |
| To GenomeBrowser | habu1_scaffold3775:201426..206490 |
| Genes list of scaffold | habu1_scaffold3775 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gdh 6pgl endoplasmic bifunctional protein isoform x2 | EC:1.1.1.49 EC:3.1.1.31 GO:0004345 GO:0006006 GO:0006098 GO:0006749 GO:0017057 GO:0050661 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3775_g12673.t1 | 1 | 1 | G6PD_N | 30 | 210 | 2.2e-38 | 132.3 | 1.80067e-42 | 2.7e-38 | 132.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3775_g12673.t1 | gi|602670716|ref|XP_007440880.1| | PREDICTED: GDH/6PGL endoplasmic bifunctional protein [Python bivittatus] | 0.0 |
| habu1_s3775_g12673.t1 | gi|637363472|ref|XP_008120678.1| | PREDICTED: GDH/6PGL endoplasmic bifunctional protein isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s3775_g12673.t1 | gi|637363468|ref|XP_008120677.1| | PREDICTED: GDH/6PGL endoplasmic bifunctional protein isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s3775_g12673.t1 | gi|701333736|ref|XP_009979490.1| | PREDICTED: LOW QUALITY PROTEIN: GDH/6PGL endoplasmic bifunctional protein [Tauraco erythrolophus] | 0.0 |
| habu1_s3775_g12673.t1 | gi|704256394|ref|XP_010149571.1| | PREDICTED: LOW QUALITY PROTEIN: GDH/6PGL endoplasmic bifunctional protein-like [Eurypyga helias] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.8 |
| Venom grand-1 | 6.4 |
| Pit, infrared sensing | 6.0 |
| Nose | 13.5 |
| Brain-1 | 2.0 |
| Eye | 3.9 |
| fetal fibroblast | 3.8 |
| venom gland-2 | 8.4 |
| Brain-2 | 1.9 |
| Spleen | 4.0 |
| Lung | 14.7 |
| Liver | 90.6 |
| Kidney | 38.5 |
| Pancreas | 2.6 |
| Small intestine | 9.8 |
| Large intestine | 15.4 |
| Stomach | 13.7 |
| heart | 2.8 |
| ovary | 28.6 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s3775_g12673.t1 |
|---|---|
| Definition | - |
>habu1_s3775_g12673.t1 aacgccgcccgtgggagggagagggcttaaagatgctttttcaagggaccctggccgtcatcttgttctgggggattttc cccactgaaagcaaggaatctcggggccacgtgtcggtcatcctcttgggggccacgggggatctggccaaaaaatacct gtggcaaagcttgttccagctttacctggacgaagtgagcaacgggcacactttcaccttctatggggccactcagcagg agcccgaggtggggcaaaagctgatgtttgagcccttgaagaagctggcctgctcgacggaggtgccgcccaacagatgc gcggtgctaaaggaccagttcttgaaattaacggagtaccaccagctcaaaggggaagaagactatgccaagctcagcca gggcattaagaccagcctcgctcaggaggagctggtggaaagcggccgcatcttttacctgtccgtgccgccgttcgcct acgccaaaattgcccggcacattaacagcagctgcaggcctccctccggcgcctggttgcgggtggtgctggagaaaccc tttggacacgattgggtgtctgcccaacagctggccgaggagctggcgagggtcttccgcgaagaggagatttaccgggt ggatcactacctggggaagcag |
|
Protein
| Protein ID | habu1_s3775_g12673.t1 |
|---|---|
| Definition | - |
>habu1_s3775_g12673.t1 MLFQGTLAVILFWGIFPTESKESRGHVSVILLGATGDLAKKYLWQSLFQLYLDEVSNGHTFTFYGATQQEPEVGQKLMFE PLKKLACSTEVPPNRCAVLKDQFLKLTEYHQLKGEEDYAKLSQGIKTSLAQEELVESGRIFYLSVPPFAYAKIARHINSS CRPPSGAWLRVVLEKPFGHDWVSAQQLAEELARVFREEEIYRVDHYLGKQ |
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