Gene
| Gene Model ID | habu1_s3879_g12878 |
|---|---|
| Locus | habu1_scaffold3879 : 166629 ... 190765 : - |
| To GenomeBrowser | habu1_scaffold3879:166629..190765 |
| Genes list of scaffold | habu1_scaffold3879 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3879_g12878.t1 | 1 | 1 | BTB | 58 | 142 | 3.8e-21 | 75.1 | 5.0e-24 | 8.3e-21 | 74.0 |
| habu1_s3879_g12878.t1 | 1 | 1 | BACK | 148 | 247 | 1.3e-31 | 108.5 | 2.7e-34 | 4.4e-31 | 106.7 |
| habu1_s3879_g12878.t1 | 6 | 1 | Kelch_1 | 293 | 326 | 0.0 | 256.8 | 2.5e-10 | 4.0e-07 | 29.4 |
| habu1_s3879_g12878.t1 | 4 | 1 | Kelch_3 | 294 | 338 | 1.2e-28 | 98.5 | 3.4e-06 | 0.0056 | 16.8 |
| habu1_s3879_g12878.t1 | 6 | 1 | Kelch_6 | 295 | 330 | 0.0 | 171.8 | 3.8e-07 | 0.00063 | 19.8 |
| habu1_s3879_g12878.t1 | 6 | 2 | Kelch_1 | 330 | 374 | 0.0 | 256.8 | 1.6e-19 | 2.6e-16 | 58.8 |
| habu1_s3879_g12878.t1 | 6 | 2 | Kelch_6 | 330 | 374 | 0.0 | 171.8 | 1.3e-13 | 2.2e-10 | 40.2 |
| habu1_s3879_g12878.t1 | 3 | 1 | Kelch_2 | 333 | 373 | 1.2e-29 | 100.8 | 6.5e-12 | 1.1e-08 | 34.5 |
| habu1_s3879_g12878.t1 | 4 | 1 | Kelch_4 | 335 | 373 | 1.4e-33 | 114.4 | 1.1e-08 | 1.9e-05 | 24.3 |
| habu1_s3879_g12878.t1 | 4 | 2 | Kelch_3 | 339 | 381 | 1.2e-28 | 98.5 | 5.3e-08 | 8.7e-05 | 22.5 |
| habu1_s3879_g12878.t1 | 6 | 3 | Kelch_1 | 376 | 421 | 0.0 | 256.8 | 1.6e-13 | 2.6e-10 | 39.6 |
| habu1_s3879_g12878.t1 | 6 | 3 | Kelch_6 | 389 | 424 | 0.0 | 171.8 | 3.3e-08 | 5.4e-05 | 23.1 |
| habu1_s3879_g12878.t1 | 6 | 4 | Kelch_1 | 423 | 468 | 0.0 | 256.8 | 1.1e-16 | 1.7e-13 | 49.8 |
| habu1_s3879_g12878.t1 | 3 | 2 | Kelch_2 | 423 | 467 | 1.2e-29 | 100.8 | 1.9e-07 | 0.00031 | 20.3 |
| habu1_s3879_g12878.t1 | 6 | 4 | Kelch_6 | 429 | 471 | 0.0 | 171.8 | 3.2e-09 | 5.2e-06 | 26.3 |
| habu1_s3879_g12878.t1 | 4 | 2 | Kelch_4 | 429 | 466 | 1.4e-33 | 114.4 | 2.0e-08 | 3.2e-05 | 23.5 |
| habu1_s3879_g12878.t1 | 6 | 5 | Kelch_1 | 470 | 520 | 0.0 | 256.8 | 1.3e-14 | 2.1e-11 | 43.1 |
| habu1_s3879_g12878.t1 | 4 | 3 | Kelch_4 | 470 | 520 | 1.4e-33 | 114.4 | 3.4e-09 | 5.7e-06 | 26.0 |
| habu1_s3879_g12878.t1 | 6 | 5 | Kelch_6 | 473 | 524 | 0.0 | 171.8 | 2.0e-12 | 3.3e-09 | 36.5 |
| habu1_s3879_g12878.t1 | 4 | 3 | Kelch_3 | 481 | 531 | 1.2e-28 | 98.5 | 4.5e-08 | 7.5e-05 | 22.7 |
| habu1_s3879_g12878.t1 | 6 | 6 | Kelch_1 | 523 | 563 | 0.0 | 256.8 | 5.5e-15 | 9.0e-12 | 44.3 |
| habu1_s3879_g12878.t1 | 6 | 6 | Kelch_6 | 523 | 566 | 0.0 | 171.8 | 1.4e-10 | 2.3e-07 | 30.6 |
| habu1_s3879_g12878.t1 | 3 | 3 | Kelch_2 | 524 | 563 | 1.2e-29 | 100.8 | 2.2e-06 | 0.0036 | 17.0 |
| habu1_s3879_g12878.t1 | 4 | 4 | Kelch_4 | 528 | 563 | 1.4e-33 | 114.4 | 3.2e-09 | 5.3e-06 | 26.0 |
| habu1_s3879_g12878.t1 | 4 | 4 | Kelch_3 | 533 | 564 | 1.2e-28 | 98.5 | 5.2e-07 | 0.00085 | 19.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3879_g12878.t1 | gi|602633630|ref|XP_007423692.1| | PREDICTED: kelch-like protein 4-like [Python bivittatus] | 0.0 |
| habu1_s3879_g12878.t1 | gi|637348723|ref|XP_008117897.1| | PREDICTED: kelch-like protein 4 [Anolis carolinensis] | 0.0 |
| habu1_s3879_g12878.t1 | gi|675421370|ref|XP_008924213.1| | PREDICTED: LOW QUALITY PROTEIN: kelch-like protein 4 [Manacus vitellinus] | 0.0 |
| habu1_s3879_g12878.t1 | gi|527260166|ref|XP_005148334.1| | PREDICTED: kelch-like protein 4 [Melopsittacus undulatus] | 0.0 |
| habu1_s3879_g12878.t1 | gi|543733726|ref|XP_005507873.1| | PREDICTED: LOW QUALITY PROTEIN: kelch-like protein 4-like [Columba livia] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.3 |
| Nose | 0.6 |
| Brain-1 | 7.3 |
| Eye | 1.6 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.5 |
| Brain-2 | 4.1 |
| Spleen | 0.9 |
| Lung | 4.2 |
| Liver | 0.4 |
| Kidney | 0.3 |
| Pancreas | 0.0 |
| Small intestine | 1.1 |
| Large intestine | 2.0 |
| Stomach | 1.0 |
| heart | 6.6 |
| ovary | 0.5 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s3879_g12878.t1 |
|---|---|
| Definition | - |
>habu1_s3879_g12878.t1 ggccgagaaaggagagggccacagaagcagccaggagttacagatgattaccgaagaggacaccaatgagtcggtcaaaa ggagactgggagcagttcttggaaaaatttgagagccctcttttttccggcatcctatcctcgtggatcagactacacct ggaaccgaggacaaccactgcttcccaaaggatatcaaatgacccaaatgtcatttgcaaaatgaaagcaggctcacaaa ccataaagctggttctgagcgccgtgtctgactattttgcggcaatgttcaccaatgatgtccgcgaagcaaaacaagag gaagtcaaaatggaaggtgtagatcctgacgcactgaaggatcttgtgctctatgcctacacgggcatgctggagctaaa agaagacaccattgagagcttgttggctgcagcttgtcttctccaactgtcacaagtgattgaggtctgctgcaattttc tcatgaagcaacttcatccttcaaactgcttgggaatccggtcctttggagatgctcaagggtgctcacaactcttgcaa gtggcccatgtctacactatggaacacttcaccgaagtcataaagaaccaggagttcctcttacttcctgctggtgaaat tgctaagctcctttccagtgatgatattaatgtcccagatgaagaatcaatcttcaaggcattaatgatatgggttcggc acgatttagacagtcggcaacaagatcttggaatgcttctgtcttacataaggttgccccttcttcctccagagctttta gctgatctggaaaacagccccatgtttacgacggatcttcagtgccagaaactcttaatggaagcaatgaaataccacct gttaccagaaaggagatccatgatgcaaagtccccggacaaagcccagaaagtccaccgttggttgtctctatgctgtgg gaggcatggatgccaccaaaggcaccaccaccattgagaaatatgacttgagaaccaacagctggatacagattggaacg atgagtggaaggcggctgcaatttggagtggctgtgattgacaacaagctctacgttgtgggaggaagagatggcttgag gacatcgaataccgttgagtgtttcaacccaacaactaaagtctggactgtgatgccccccatgtcaacccataggcatg gcttaggggtagcaatgctcgaaggacccatgtatgctgttgggggccatgatggatggagctatctaaacacagttgaa cgatgggatccccaggctcggcagtggaattacgtggcaagcatgtcaactccaaggagtactgtgggagttgcagcttt gaacagcaagttgtatgcagttggaggacgtgatggaagctcctgcttgaaatccatggagtgttttgatccccacacga acaaatggagcatctgtaacccaatgtccaaaagacgtggaggagttggcgtagcaacctacaatgggttcctctatgct gtgggaggccatgatgcccctgcttcgaatcactgttctcggctttctgattgtgtagaaaggtatgaccccaaaactga cacttggaccactgtagcacctttgagtgttcctcgcgacgctgttgggatttgtaccctcggagatagattgtatgccg tcggtggctacgatgggcacacctatttgaacacagtagaatcttacgacgcacaaaacaatgaatggacagaggaagtg ccagtcaacatcggaagagccggtgcctgtgtcgtagttgtgaaacttccatgacggtcgtcttcaggttgccactgatt ttgagacacgattgggctttgtggagaatgaaaagagctgattaaaatatagatgatttggcatctga |
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Protein
| Protein ID | habu1_s3879_g12878.t1 |
|---|---|
| Definition | - |
>habu1_s3879_g12878.t1 MSRSKGDWEQFLEKFESPLFSGILSSWIRLHLEPRTTTASQRISNDPNVICKMKAGSQTIKLVLSAVSDYFAAMFTNDVR EAKQEEVKMEGVDPDALKDLVLYAYTGMLELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGC SQLLQVAHVYTMEHFTEVIKNQEFLLLPAGEIAKLLSSDDINVPDEESIFKALMIWVRHDLDSRQQDLGMLLSYIRLPLL PPELLADLENSPMFTTDLQCQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGCLYAVGGMDATKGTTTIEKYDLRTNSW IQIGTMSGRRLQFGVAVIDNKLYVVGGRDGLRTSNTVECFNPTTKVWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSY LNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSICNPMSKRRGGVGVATYN GFLYAVGGHDAPASNHCSRLSDCVERYDPKTDTWTTVAPLSVPRDAVGICTLGDRLYAVGGYDGHTYLNTVESYDAQNNE WTEEVPVNIGRAGACVVVVKLP |
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