Gene
| Gene Model ID | habu1_s3879_g12881 |
|---|---|
| Locus | habu1_scaffold3879 : 325402 ... 423464 : - |
| To GenomeBrowser | habu1_scaffold3879:325402..423464 |
| Genes list of scaffold | habu1_scaffold3879 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutamate receptor 3 | GO:0004971 GO:0005234 GO:0007268 GO:0016021 GO:0030054 GO:0034220 GO:0035235 GO:0045211 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3879_g12881.t2 | 1 | 1 | ANF_receptor | 8 | 348 | 0.0 | 189.2 | 0.0 | 0.0 | 188.6 |
| habu1_s3879_g12881.t2 | 1 | 1 | SBP_bac_3 | 391 | 758 | 2.7e-26 | 92.2 | 1.4e-29 | 5.2e-26 | 91.2 |
| habu1_s3879_g12881.t2 | 1 | 1 | Lig_chan-Glu_bd | 394 | 458 | 1.3e-24 | 85.8 | 8.4e-28 | 3.1e-24 | 84.7 |
| habu1_s3879_g12881.t2 | 1 | 1 | Lig_chan | 513 | 795 | 0.0 | 202.8 | 0.0 | 0.0 | 201.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.0 |
| Brain-1 | 24.6 |
| Eye | 4.9 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 23.3 |
| Spleen | 0.6 |
| Lung | 0.5 |
| Liver | 0.4 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.2 |
| Stomach | 0.2 |
| heart | 0.3 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s3879_g12881.t1 |
|---|---|
| Definition | - |
>habu1_s3879_g12881.t1 gaggacttttcatgagaaacactgtccaggagcacagcgcgttccgatttgctgtgcagttgtacaacacaaaccaaaat ttcacagaaaagccgttccatttgaactaccatgtggatcatctggattcttctaacagtttttcggtgaccaacgcatt ctgttcccagttctccagaggagtctatgccatctttggattctatgaccagatgtcaatgaacacgctgacgtcctttt gtggggcgctgcatacgtccttcatcacgcccagctttccaactgatgctgaggtgcagttcgtcatccagatgcggcca gctctgaaaggggccatcctaagccttctgacctactataactgggaaaaattcgtatatctctatgacactgaacgagg tttttccatcctccaagctattatggaagctgctgtgcaaaataattggcaagtgacggcccgatctgtgggaagcatca aagatgttcaggagtttaaggcgatcattgaagaaatggacaagcggcaggagaagaaatacttgatagattgtgaagtg gaaagaataaacgtcattttggaacaggttgcagccctcagtaaaaattccagaagttatcactatatgcttgctaacct gggctttacagacatctcggtggaaagagtggtccaggctggggccaatgtaaccggatttcagattattaataatgaca acccattggtccaacaatttatgcagcgttgggtgagacttgatgaaagggaatttcctgaagccaaaaattctccatta aagtatacatctgcgttgacccatgatgcgatccttgttatagcggaagcgttccggtacctccgaaggcagcgggtaga tgtatcccggagaggaagtgctggagattgtttagcaaacccagctgtgccttggagccaagggattgatattgagagag cattgaagatggttcaggttcaaggaatgacaggaaatatccagtttgacacctatggacgtagaaccaattatacgatt gatgtgtatgaaatgagacctggcgggccacgaaaggctggttactggaatgaatatgagcgatttgtgcctgcagttga tcctagtgtttccaacgatacatcctcagtggagaacagaaccattgtggtgactaccatccttgaagcaccctacgtga tgcgcaagcagtctcctgaccagaaggaagggaatgagaaatacgaaggctattgtgttgaccttgcttacgaaattgcg aaacatgttgggattaaatatgtcctgtccattgtccctgatgggaagtatggagcaaaggatcctgagactaaaatgtg gaatggcatggtgggtgagctggtctatgggagagcagatatagctgttgccccactgaccataaccctggtccgagaag aagtcatagatttttccaaaccttttatgagcttgggcatttctatcatgatcaagaagccccagaaatctaaaccaggg gtcttctcctttctggatcctttggcctatgaaatttggatgtgtatagtctttgcgtacattggcgtcagcgtagttct gtttctagtcagccgattcagtccttacgagtggcatttggaagataaccaggaagagcctcgggaccctcaaagtcctc ctgatcctcccaatgaatttggaatatttaacagcctttggttttccctgggtgcctttatgcagcaaggatgtgatatt tctccaaggtctctctcagggcgaatcgtcggaggcgtttggtggttcttcaccctcatcatcatctcctcctacactgc caacctggctgccttcctcacggtggaaaggatggtgtcccctattgaaagcgctgaagacttggctaaacagaccgaga tcgcctatggaaccttggattccggctcgaccaaagaattttttagaagatccaaaattgctgtctatgagaaaatgtgg tcgtacatgaagtcggcagagccctcggtgtttgccaaaaccacggccgacggggtggcccgcgtgcggaaatcaaaggg aaagtttgcattcctgcttgagtccaccatgaacgagtacattgaacagcgaaagccctgtgacacaatgaaagttggtg ggaacctggattccaaaggctatggtgtagcaactcctaaaggctcagcattaagaactcctgtaaaccttgcagtattg aaactcagtgaacaaggcatcttagacaagctgaaaaacaaatggtggtacgataaaggtgaatgtggtgccaaggattc cggaagcaaggacaagacaagtgcactcagcttgagcaatgtggcaggggttttttatatcctcgttggaggcctcggcc ttgccatgacggtggccttgatagagttctgttacaagtctcgagacgagtccaaacgaatgaaaatcacaaagaacaca caaaactttaagcctgctcctgcacccaatacccagaattatgcaacctacagagaaggatacaacgtgtacggaacaga aagtgtaaagatctagtggtatggctaaaggttgaatcctgcatttatcatggcttgcaaagggaggaacaactgagatt cccagttacttcagtgatcctggtcacctgagccaattttactctctcccaggtgtcggttttgacacaatactgatgat ggtgcaatgaacttttcataggattctttttttttttgtttttccttcagtgccttaacaggagattcgtaagactttag aaacaatgcaaaccatcaaaaaaaaaatattttttttttgctttgcttgaaaaaacgaacaaaacacggcaagagactag tccgttgagcagactatattcataaaggcagagacggagagagagagatggagagaaaagacgtggaaagtattcttgta aaaacaaaagaaggaaggaaggaaggaagaaagaataaaaatcaaaacattcaacagaagc |
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| Transcript ID | habu1_s3879_g12881.t2 |
| Definition | - |
>habu1_s3879_g12881.t2 gaggacttttcatgagaaacactgtccaggagcacagcgcgttccgatttgctgtgcagttgtacaacacaaaccaaaat ttcacagaaaagccgttccatttgaactaccatgtggatcatctggattcttctaacagtttttcggtgaccaacgcatt ctgttcccagttctccagaggagtctatgccatctttggattctatgaccagatgtcaatgaacacgctgacgtcctttt gtggggcgctgcatacgtccttcatcacgcccagctttccaactgatgctgaggtgcagttcgtcatccagatgcggcca gctctgaaaggggccatcctaagccttctgacctactataactgggaaaaattcgtatatctctatgacactgaacgagg tttttccatcctccaagctattatggaagctgctgtgcaaaataattggcaagtgacggcccgatctgtgggaagcatca aagatgttcaggagtttaaggcgatcattgaagaaatggacaagcggcaggagaagaaatacttgatagattgtgaagtg gaaagaataaacgtcattttggaacaggttgcagccctcagtaaaaattccagaagttatcactatatgcttgctaacct gggctttacagacatctcggtggaaagagtggtccaggctggggccaatgtaaccggatttcagattattaataatgaca acccattggtccaacaatttatgcagcgttgggtgagacttgatgaaagggaatttcctgaagccaaaaattctccatta aagtatacatctgcgttgacccatgatgcgatccttgttatagcggaagcgttccggtacctccgaaggcagcgggtaga tgtatcccggagaggaagtgctggagattgtttagcaaacccagctgtgccttggagccaagggattgatattgagagag cattgaagatggttcaggttcaaggaatgacaggaaatatccagtttgacacctatggacgtagaaccaattatacgatt gatgtgtatgaaatgagacctggcgggccacgaaaggctggttactggaatgaatatgagcgatttgtgcctgcagttga tcctagtgtttccaacgatacatcctcagtggagaacagaaccattgtggtgactaccatccttgaagcaccctacgtga tgcgcaagcagtctcctgaccagaaggaagggaatgagaaatacgaaggctattgtgttgaccttgcttacgaaattgcg aaacatgttgggattaaatatgtcctgtccattgtccctgatgggaagtatggagcaaaggatcctgagactaaaatgtg gaatggcatggtgggtgagctggtctatgggagagcagatatagctgttgccccactgaccataaccctggtccgagaag aagtcatagatttttccaaaccttttatgagcttgggcatttctatcatgatcaagaagccccagaaatctaaaccaggg gtcttctcctttctggatcctttggcctatgaaatttggatgtgtatagtctttgcgtacattggcgtcagcgtagttct gtttctagtcagccgattcagtccttacgagtggcatttggaagataaccaggaagagcctcgggaccctcaaagtcctc ctgatcctcccaatgaatttggaatatttaacagcctttggttttccctgggtgcctttatgcagcaaggatgtgatatt tctccaaggtctctctcagggcgaatcgtcggaggcgtttggtggttcttcaccctcatcatcatctcctcctacactgc caacctggctgccttcctcacggtggaaaggatggtgtcccctattgaaagcgctgaagacttggctaaacagaccgaga tcgcctatggaaccttggattccggctcgaccaaagaattttttagaagatccaaaattgctgtctatgagaaaatgtgg tcgtacatgaagtcggcagagccctcggtgtttgccaaaaccacggccgacggggtggcccgcgtgcggaaatcaaaggg aaagtttgcattcctgcttgagtccaccatgaacgagtacattgaacagcgaaagccctgtgacacaatgaaagttggtg ggaacctggattccaaaggctatggtgtagcaactcctaaaggctcagcattaagaactcctgtaaaccttgcagtattg aaactcagtgaacaaggcatcttagacaagctgaaaaacaaatggtggtacgataaaggtgaatgtggtgccaaggattc cggaagcaaggacaagacaagtgcactcagcttgagcaatgtggcaggggttttttatatcctcgttggaggcctcggcc ttgccatgacggtggccttgatagagttctgttacaagtctcgagacgagtccaaacgaatgaaaatcacaaagaacaca caaaactttaagcctgctcctgcacccaatacccagaattatgcaacctacagagaaggatacaacgtgtacggaacaga aagtgtaaagatctagtgatcctgcatttatcatggcttgcaaagggaggaacaactgagattcccagttacttcagtga tcctggtcacctgagccaattttactctctcccaggtgtcggttttgacacaatactgatgatggtgcaatgaacttttc ataggattctttttttttttgtttttccttcagtgccttaacaggagattcgtaagactttagaaacaatgcaaaccatc aaaaaaaaaatattttttttttgctttgcttgaaaaaacgaacaaaacacggcaagagactagtccgttgagcagactat attcataaaggcagagacggagagagagagatggagagaaaagacgtggaaagtattcttgtaaaaacaaaagaaggaag gaaggaaggaagaaagaataaaaatcaaaacattcaacagaagc |
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Protein
| Protein ID | habu1_s3879_g12881.t1 |
|---|---|
| Definition | - |
>habu1_s3879_g12881.t1 MRNTVQEHSAFRFAVQLYNTNQNFTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGAL HTSFITPSFPTDAEVQFVIQMRPALKGAILSLLTYYNWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQ EFKAIIEEMDKRQEKKYLIDCEVERINVILEQVAALSKNSRSYHYMLANLGFTDISVERVVQAGANVTGFQIINNDNPLV QQFMQRWVRLDEREFPEAKNSPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKM VQVQGMTGNIQFDTYGRRTNYTIDVYEMRPGGPRKAGYWNEYERFVPAVDPSVSNDTSSVENRTIVVTTILEAPYVMRKQ SPDQKEGNEKYEGYCVDLAYEIAKHVGIKYVLSIVPDGKYGAKDPETKMWNGMVGELVYGRADIAVAPLTITLVREEVID FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNQEEPRDPQSPPDPP NEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYG TLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLD SKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMT VALIEFCYKSRDESKRMKITKNTQNFKPAPAPNTQNYATYREGYNVYGTESVKI |
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| Protein ID | habu1_s3879_g12881.t2 |
| Definition | - |
>habu1_s3879_g12881.t2 MRNTVQEHSAFRFAVQLYNTNQNFTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGAL HTSFITPSFPTDAEVQFVIQMRPALKGAILSLLTYYNWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQ EFKAIIEEMDKRQEKKYLIDCEVERINVILEQVAALSKNSRSYHYMLANLGFTDISVERVVQAGANVTGFQIINNDNPLV QQFMQRWVRLDEREFPEAKNSPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKM VQVQGMTGNIQFDTYGRRTNYTIDVYEMRPGGPRKAGYWNEYERFVPAVDPSVSNDTSSVENRTIVVTTILEAPYVMRKQ SPDQKEGNEKYEGYCVDLAYEIAKHVGIKYVLSIVPDGKYGAKDPETKMWNGMVGELVYGRADIAVAPLTITLVREEVID FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNQEEPRDPQSPPDPP NEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYG TLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLD SKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMT VALIEFCYKSRDESKRMKITKNTQNFKPAPAPNTQNYATYREGYNVYGTESVKI |
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