Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3890_g12898
Locus habu1_scaffold3890 : 376 ... 23266 : +
To GenomeBrowser habu1_scaffold3890:376..23266
Genes list of scaffold habu1_scaffold3890

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s3890_g12898.t1 gi|602635508|ref|XP_007424620.1| PREDICTED: uncharacterized protein C9orf84 homolog [Python bivittatus] 0.0
habu1_s3890_g12898.t1 gi|637353068|ref|XP_008118710.1| PREDICTED: uncharacterized protein C9orf84 homolog [Anolis carolinensis] 0.0
habu1_s3890_g12898.t1 gi|641763398|ref|XP_008166987.1| PREDICTED: uncharacterized protein C9orf84 homolog [Chrysemys picta bellii] 0.0
habu1_s3890_g12898.t1 gi|591381446|ref|XP_007065259.1| PREDICTED: uncharacterized protein C9orf84 homolog [Chelonia mydas] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.2
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.1
heart 0.0
ovary 0.2
cheek muscle 0.0

Transcript
Transcript IDhabu1_s3890_g12898.t1
Definition-
>habu1_s3890_g12898.t1
tgtactgatttactacttttgttggtatatattgtaacatatctatatttgcttttaaattgaaaaattaataaaaattt
attttaaaaaaaaaagagggattggtactccttttttcattttatttttattatgtattaaatcatcgattcagcttata
aatcagaatataatcaaagatctcaaggaactctggatttcagattcttttgtaatgatctcaaaactcccccagttata
aagaatcaacaattatatgtaggcagaattctgttcagaaaagatggtcaaattaatgcacaattatgagggaactggtt
ataaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagacataatcttcacaggaggctgcttatagtgtcagtctca
ggcatatcatatcctggaagctgcagcggctccagttttgaaagaacttataaagcttgacatgcagaattggagatttg
ccacacttaattctgataacaccaggttttttttgaaacaacaagagaaagtgatcagtgacacattgaaacaaggtagc
aaagaggcaaagtatattctggcattcagacatgctgctattcttcatttgctggttacagttcgtgatcttttattaac
ctgtaacttgaacactgcattagaatatctgtccaagacaaaagataattataaagatttccaagactatgacctggata
ttatttggaaacagctgaaaattgtgaaattcgttgtgcaggagcacaaagtcagtcccaaagtgacagaattacagcat
caaatttctaagtgggtacagaataatccaaatgatcagaataaggtattaattgtgattagaatggattttgatgaaga
aacagaagtcctaatcaataccattaatacagtgcaaggcttgaaggccatatttttgaattctaagaaaagaggaatgt
tgtttgagagtaaacatataataaatagtttggacgtatattcttgtatcattgtacataatcaacatattgggcctgat
ttcccgtgggccaatttttcattggtgatagagtacaactacaatgagaattcctgttggattgatctatgtaaaaaaat
gaatataccttatttaattttccaaacagctcccccagaagcaattgaaactgaagagtttttgtctgataatcttggat
atgatcttctgaggttgtcaattccttatgtttttttgacatctgaaggacttctcaataccccagaaatccttcagtta
ctggaatccaagtataatattactttaattgaaagaaactgctgtgaggccttaaactattttggaggcacagaacatta
tgttgtgatgactatagatgaatgcacagctattgttatgcagaacatggaagaactcaattatgaaaactcctctaata
atattgtcttaagactgatggcgctatcactccagtatgcctcctgttggattattttatactccagagaaagattaaat
tctaaatacagcctaactggaaaatccctgcatcatcttgctttaatttatgcagccttgatttcttttgcacagaaatc
agaagactttgaagtgaagatggcccttacaccaggagttgaagaaacagcacttttggttcgccagatagctgaccaca
tattattagcttctaaacaacatccacaggagtggctaaacaagtcatggctttctgtcctgctatcagaagcagagaaa
tgcttgcttacatttccatgcatgaatccactagttgctcaagtcatgctaaagaaaagttcttcgctgggatggctcct
ggcagcatcttttgctgagcttcaggaacttctgcctgaggtgccagaaaaggttttgaagacttttagtgacatcacat
cattatacatcttcaagccactaacacaaaaagaaattacgcctcttcaaggaaatattaattctgccacctgctctcgt
tctcaacttccctttcttgaggctttgttctccagatttcaaggacataattcctttactgagtattcagaagaacagat
caaaaactgttccccggatatctgccagaatggatcttgtggctctctgaaatcaactaaagaacataacttagatctac
cttcaatatcgtatgaaggagacacctgtccctttcaggataatgtaagggtagagaggcagctttatctcccatttccg
aaaaaagtggaaacagaaacaagaataaatgcatcacatttaacactgaataatattggaggaccttcccatatcaacag
tgaaaccacagtgccatatttgcactgtaaccaggactctagcccttatattgagaattgtccactaaataggattactg
tttcaaaagtggacacaggcaaacagctagatatctctgagttcttgaagaagccgatctatcatgatgctaaaaatgaa
catctgggaaaaattcaacctcttacgcaacagctgaattctttccatgatttcaagcattctcctcatttcgtttctag
tagaaattatgttccattccagcaaagctcaggcatttttttagaaataggaagaaaagcaagcagcaatcctgaatcag
aggaaagattttggggtaaccccccattcatacaagcaatggattcttctccctgtgattcgcacataggcaaagccata
tccagtccagacaggttcatgaacttggatattcagtttactggagaatataggagggggaaaggacctaattcattgtc
agatgaacaaagacaacaagacgtttcaggtaagagcacaaagcaaaatgctgctattttctaaatttcagaatactaag
agttaccagggagccttcaaatcttgtctttgttctaatgagacgtaccatttagtaaatatttttaaattgttcttttg
g

Protein
Protein IDhabu1_s3890_g12898.t1
Definition-
>habu1_s3890_g12898.t1
MVKLMHNYEGTGYKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDIIFTGGCLXCQSQAYHILEAAAAPVLK
ELIKLDMQNWRFATLNSDNTRFFLKQQEKVISDTLKQGSKEAKYILAFRHAAILHLLVTVRDLLLTCNLNTALEYLSKTK
DNYKDFQDYDLDIIWKQLKIVKFVVQEHKVSPKVTELQHQISKWVQNNPNDQNKVLIVIRMDFDEETEVLINTINTVQGL
KAIFLNSKKRGMLFESKHIINSLDVYSCIIVHNQHIGPDFPWANFSLVIEYNYNENSCWIDLCKKMNIPYLIFQTAPPEA
IETEEFLSDNLGYDLLRLSIPYVFLTSEGLLNTPEILQLLESKYNITLIERNCCEALNYFGGTEHYVVMTIDECTAIVMQ
NMEELNYENSSNNIVLRLMALSLQYASCWIILYSRERLNSKYSLTGKSLHHLALIYAALISFAQKSEDFEVKMALTPGVE
ETALLVRQIADHILLASKQHPQEWLNKSWLSVLLSEAEKCLLTFPCMNPLVAQVMLKKSSSLGWLLAASFAELQELLPEV
PEKVLKTFSDITSLYIFKPLTQKEITPLQGNINSATCSRSQLPFLEALFSRFQGHNSFTEYSEEQIKNCSPDICQNGSCG
SLKSTKEHNLDLPSISYEGDTCPFQDNVRVERQLYLPFPKKVETETRINASHLTLNNIGGPSHINSETTVPYLHCNQDSS
PYIENCPLNRITVSKVDTGKQLDISEFLKKPIYHDAKNEHLGKIQPLTQQLNSFHDFKHSPHFVSSRNYVPFQQSSGIFL
EIGRKASSNPESEERFWGNPPFIQAMDSSPCDSHIGKAISSPDRFMNLDIQFTGEYRRGKGPNSLSDEQRQQDVSGKSTK
QNAAIF

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