Gene
| Gene Model ID | habu1_s3890_g12901 |
|---|---|
| Locus | habu1_scaffold3890 : 147426 ... 176685 : - |
| To GenomeBrowser | habu1_scaffold3890:147426..176685 |
| Genes list of scaffold | habu1_scaffold3890 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| structural maintenance of chromosomes protein 2-like | GO:0000228 GO:0000796 GO:0005524 GO:0005737 GO:0007076 GO:0010032 GO:0045132 GO:0046982 GO:0051383 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3890_g12901.t1 | 1 | 1 | SMC_N | 2 | 1161 | 0.0 | 205.1 | 0.0 | 0.0 | 200.5 |
| habu1_s3890_g12901.t1 | 1 | 1 | AAA_23 | 5 | 287 | 5.4e-07 | 30.1 | 2.2e-10 | 5.4e-07 | 30.1 |
| habu1_s3890_g12901.t1 | 2 | 1 | AAA_21 | 27 | 88 | 5.7e-10 | 39.6 | 9.2e-10 | 2.3e-06 | 27.8 |
| habu1_s3890_g12901.t1 | 1 | 1 | SMC_hinge | 521 | 639 | 7.6e-23 | 80.7 | 3.1e-26 | 7.6e-23 | 80.7 |
| habu1_s3890_g12901.t1 | 2 | 2 | AAA_21 | 978 | 1144 | 5.7e-10 | 39.6 | 1.7e-08 | 4.3e-05 | 23.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3890_g12901.t1 | gi|602635492|ref|XP_007424612.1| | PREDICTED: structural maintenance of chromosomes protein 2-like [Python bivittatus] | 0.0 |
| habu1_s3890_g12901.t1 | gi|637353049|ref|XP_003227371.2| | PREDICTED: structural maintenance of chromosomes protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s3890_g12901.t1 | gi|512813900|ref|XP_002936738.2| | PREDICTED: structural maintenance of chromosomes protein 2 isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s3890_g12901.t1 | gi|147898636|ref|NP_001081372.1| | structural maintenance of chromosomes protein 2 [Xenopus laevis] | 0.0 |
| habu1_s3890_g12901.t1 | gi|530606262|ref|XP_005294842.1| | PREDICTED: structural maintenance of chromosomes protein 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.8 |
| Nose | 1.1 |
| Brain-1 | 0.2 |
| Eye | 0.2 |
| fetal fibroblast | 22.3 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.2 |
| Spleen | 0.7 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.4 |
| Large intestine | 0.5 |
| Stomach | 0.3 |
| heart | 0.4 |
| ovary | 23.4 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s3890_g12901.t1 |
|---|---|
| Definition | - |
>habu1_s3890_g12901.t1 ggaggaagctgaaaagcggagcggctgcggttgggtcggttggaggcggcccttcttggcgggttggaggtgaatttact tggaatctatagggaaatcagctgaaatgtacatcaggtcaattgttcttgaaggttttaagtcttacgctcagaggaca gaagttaatgattttgaccctctattcaatgctattaccggcttaaatggaagtggcaaatcaaatatcctggactccat ctgttttttattgggaatcaccaatctgtcacaggtgagagcttccaacttgcaagaccttgtttacaaaaatgggcagg ctggaattactaaggcttctgtttctatcacttttgataattttgataagaagcagagcccgctaggatttgagaatcat gatgagataacagtcacaagacaggtggtgattggaggcagaaataaatacttaatcaatggtgtcaatgcaaacaatac cagagtacaagatctgttctgctctgttggattgaatgtcaataatcctcattttcttattatgcagggccgaattacca aagtgctcaatatgaagcccccagagatattggctatgattgaagaagcagctggcacaaggatgtatgagtgtaagaaa ctagcagcacaaaaaactattgagaaaaaagaagcaaaactcaaagaaatttgcacgattttagaggaagaaatcacacc caccttgcaaaaattgaaagaggaacgatcctcctatttggaataccaaaaagttgtgagagagatagaacacctgagcc gtctgtatgtggcatatcagtttacaatagccgaagaaaccaaggtacattctgctgatgtgctaaaggaaatggaaagc agtatttcaaaacttcaagaagggatgactgaaaatgagaagaaggtgaagcaacttagcaaagaaataacagagatgga aaacaaaagggatcaagaatttggtggtgtgcttcattctctagaagaagctcttgcagaggttcagagaactgatacca aagtacaaagtaccctggctatcaaaaagcaaaatttacaaagtgacgagaaaaagcagaaggaattggttaaagccatg gaagaggattctaaagccttagccttgaaagaaaaagaagtcaagaagatgagagatgctttgagtgttcttcaggagga caacaataaagacactgaggctttagctgcagcgcagcagcatttcaatgcagtgtcagctggactgtccagcagcgaag atggggaagatgctactcttgctggacagatgatgacttgcaagaatgacataagcaaagcagagacagaagctaagcaa gctcagatgaaactgaaacacgcccagcaagaactaaagacaaaacagagtgcagtaaaaaaaatggatggtggctacaa gaaagaccaagaatcctttgaagcagctaaaaaacagaaagagaaacttgaacatgaaatgaagaaactcaactatgaag ataaaaaagaagagcgtcttttagaaaagcaaaaggagttatcccgtgtggtaaatcgtttgagggaatcctatgaaact ttcctggtcaggttccccaatctacgttttgaatacagaaatccagaaacgaactggaatccagatcgtgtgaaagggct ggttgcatctttgattactgtgaaagatgtttctacagcgacagcactagaagtagtggctggcggtcgactttataatg ttgtggtggacactgaggtgactgggaaaaagctgctagagaaaggtgaactgaaacgtcgatatactatcattccactg aataaaatttcatcaagatgtattggaaaagaaaccatcaaagtggccaaaaccttggttggcgatgacaatgttaatct ggcccttagtctggtgggctatgattctgaaatccaaaaggcaatggagtatgtctttgggcaggccttggtttgtgata acatggataatgccaagagagtcacctttgacaaaaggataatgtcaaaaacagtcactctaggtggagacacatttgat ccccaaggcacactgagtggaggtgcacggtctcaggctgcttcagttttgtccaaacttcaagaaatgaaagaagcgca agacgaattgaaagcaaaagaggctgagctacagacgacaggaaaagagatagcaagtctacaggtgactcttgaaaagt atcgtcaactgaagcaacaatgggaaatgaagtctgaagaagctgatctgttacaaactaagttacaacaaagtacttat cacaagcatcaggaagagctggataccctgaaaaaaaccattgaggaaagtgaggagacgctaaagaaaacaaaagaagt gcaaaaaaaggctaaggaaaaactgaaagtgctggaaaataaaatgaaaaatgctgaagcggaaagggagaaagaactga agaatgcccaggagaaactagacggagccaagaaaaaggccaatgcttccaccaagaaaatgaaggaaaaggaacaggag gttgaagcacttgttttggagcttcaagagctaaagcaggaagcagcctcctatgaccaacagatggaggctgtgaatga agctattaaatcaatccaagaacaaattgagaccatatcagctgaggtagcaaaaaataaggaatctgtgaagaaagcac aagaagaactggcaaagcaaaaagcaatggtgctagctcaagataaagcaattaaaggcaaatctgcagaggccgtaaaa tataaagagcagaataatgaatcacagcttaaaattaaagagctagaacacaacatcagtaaacacaagcgggaggcttt ggatgcttcagcaaaagtagctaaaatgcttgctgactatgaatggatatcttcggagaaacatctttttggccaaccaa acacggcttatgatttcaaaaccaataatccaagggaagctggtcacaggcttcagaaactgcaggagaagaaggagaag ctgggcaggaatgtcaatatgagagccatgaatatgctttcagaagctgaagaaagatacaatgacttgatgaagaagaa gagaattgttgagaatgataaatctaaaatccttgcaacaattatggagcttgaccaaaagaaaaacgaagctttaaata ttgcatggaaaaaagtaaatgaagactttggatccattttctccacacttttgccaggggccaatgctatgctgtcacct cctgaagggcagacagtccttgatgggttggagtttaaagttgccctgggggtcacttggaaggagaatttaactgaatt aagtggaggccaaagatcccttgtagctttgtccttaattttggccatgctgctcttcaaacctgctccaatttacatct tggatgaagtggatgcagcccttgatctttctcatactcagaatattgggcaaatgcttcggacccatttcagacactct cagtttattgtggtttcattgaaggacggtatgttcaacaatgcaaatgtattgtacaagaccaaatttttggatggtgt ttctactgtggcacgatatacacaggctcaaaatggacagagcggagctgcacaacaaagaagcgataaattaaacaaga aagaaaagagagtgaaaataccagtggatgtttgaaaaatgtttgcagcttggtagtttgcctacatttttaaagagaaa atgggatgcaattaaattatagaaatgcctcttcctta |
|
Protein
| Protein ID | habu1_s3890_g12901.t1 |
|---|---|
| Definition | - |
>habu1_s3890_g12901.t1 MYIRSIVLEGFKSYAQRTEVNDFDPLFNAITGLNGSGKSNILDSICFLLGITNLSQVRASNLQDLVYKNGQAGITKASVS ITFDNFDKKQSPLGFENHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE ILAMIEEAAGTRMYECKKLAAQKTIEKKEAKLKEICTILEEEITPTLQKLKEERSSYLEYQKVVREIEHLSRLYVAYQFT IAEETKVHSADVLKEMESSISKLQEGMTENEKKVKQLSKEITEMENKRDQEFGGVLHSLEEALAEVQRTDTKVQSTLAIK KQNLQSDEKKQKELVKAMEEDSKALALKEKEVKKMRDALSVLQEDNNKDTEALAAAQQHFNAVSAGLSSSEDGEDATLAG QMMTCKNDISKAETEAKQAQMKLKHAQQELKTKQSAVKKMDGGYKKDQESFEAAKKQKEKLEHEMKKLNYEDKKEERLLE KQKELSRVVNRLRESYETFLVRFPNLRFEYRNPETNWNPDRVKGLVASLITVKDVSTATALEVVAGGRLYNVVVDTEVTG KKLLEKGELKRRYTIIPLNKISSRCIGKETIKVAKTLVGDDNVNLALSLVGYDSEIQKAMEYVFGQALVCDNMDNAKRVT FDKRIMSKTVTLGGDTFDPQGTLSGGARSQAASVLSKLQEMKEAQDELKAKEAELQTTGKEIASLQVTLEKYRQLKQQWE MKSEEADLLQTKLQQSTYHKHQEELDTLKKTIEESEETLKKTKEVQKKAKEKLKVLENKMKNAEAEREKELKNAQEKLDG AKKKANASTKKMKEKEQEVEALVLELQELKQEAASYDQQMEAVNEAIKSIQEQIETISAEVAKNKESVKKAQEELAKQKA MVLAQDKAIKGKSAEAVKYKEQNNESQLKIKELEHNISKHKREALDASAKVAKMLADYEWISSEKHLFGQPNTAYDFKTN NPREAGHRLQKLQEKKEKLGRNVNMRAMNMLSEAEERYNDLMKKKRIVENDKSKILATIMELDQKKNEALNIAWKKVNED FGSIFSTLLPGANAMLSPPEGQTVLDGLEFKVALGVTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALD LSHTQNIGQMLRTHFRHSQFIVVSLKDGMFNNANVLYKTKFLDGVSTVARYTQAQNGQSGAAQQRSDKLNKKEKRVKIPV DV |
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