Gene
| Gene Model ID | habu1_s3892_g12908 |
|---|---|
| Locus | habu1_scaffold3892 : 134170 ... 163925 : - |
| To GenomeBrowser | habu1_scaffold3892:134170..163925 |
| Genes list of scaffold | habu1_scaffold3892 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysophosphatidic acid receptor 1 isoform x1 | GO:0000187 GO:0007186 GO:0009986 GO:0016021 GO:0030139 GO:0030165 GO:0032060 GO:0035025 GO:0043123 GO:0070915 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3892_g12908.t1 | 1 | 1 | 7tm_1 | 72 | 316 | 1.50001e-40 | 139.0 | 3.08286e-44 | 2.29999e-40 | 138.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3892_g12908.t1 | gi|602638102|ref|XP_007425883.1| | PREDICTED: lysophosphatidic acid receptor 1-like [Python bivittatus] | 0.0 |
| habu1_s3892_g12908.t1 | gi|327285022|ref|XP_003227234.1| | PREDICTED: lysophosphatidic acid receptor 1 [Anolis carolinensis] | 0.0 |
| habu1_s3892_g12908.t1 | gi|697826191|ref|XP_009633546.1| | PREDICTED: lysophosphatidic acid receptor 1 isoform X2 [Egretta garzetta] | 0.0 |
| habu1_s3892_g12908.t1 | gi|700406940|ref|XP_009945212.1| | PREDICTED: lysophosphatidic acid receptor 1 isoform X2 [Leptosomus discolor] | 0.0 |
| habu1_s3892_g12908.t1 | gi|683930422|ref|XP_009095009.1| | PREDICTED: lysophosphatidic acid receptor 1 isoform X2 [Serinus canaria] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.4 |
| Venom grand-1 | 1.2 |
| Pit, infrared sensing | 2.4 |
| Nose | 2.6 |
| Brain-1 | 4.4 |
| Eye | 1.0 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 6.9 |
| Brain-2 | 11.4 |
| Spleen | 0.7 |
| Lung | 3.6 |
| Liver | 0.0 |
| Kidney | 0.4 |
| Pancreas | 0.0 |
| Small intestine | 3.4 |
| Large intestine | 2.8 |
| Stomach | 2.3 |
| heart | 0.3 |
| ovary | 0.0 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s3892_g12908.t1 |
|---|---|
| Definition | - |
>habu1_s3892_g12908.t1 ccaccactgctgtataaccttctggtgcttttttaaaaataaaggatgtagtccccttccatacataaaacctaccctga agccagccgaatacaaatatatgcatttgcacagaagctggaagaagtggagttctccaccttctccctataagatccct cattaactcccaaatcttcaccggtagctagaggactttgttgaatgaaataaaggataaatatcagcatgtctgagaac tgatcaagaatcttgagaatttcttcataatacctgaagcatagaaggcagagagtactttaaaaaataattcactttgc tgggtaaatatggcagatccttcagcagaagtaccgttttttatgatgacacacccacaaataattgaatctgcagacat gaatgaacctcagtgctactacaacgaaaccattgccttcttttataaccaaagcgggaaaactctagcaactgaatgga acactgtgagcaagcttgtaatgggactcgggattacagtttgtgtttttatcatgctagccaacctcttggtgatggtg gccatttacgtcaaccggcgttttcattttcctatttattacctaatggctaacttagcagctgctgacttctttgcagg gctggcatatttttacctgatgtttaacacaggacccaacactagaagattgactgtcagcacatggcttcttcgccagg gactcattgacaccagcctgactgcttcagtggccaacttattggccattgccatagaaaggcacatcaccgtgtttcgc atgcagctccatacgaggatgagtaatcggcgagtggtggtggtgattgtggtcatctggacggtggccattgtcatggg tgctataccgagcgttggctggaattgtatctgtgatctcgctcactgttctaacatggcaccactctacagcgactctt acttggtcttctgggctgttttcaatttagtcacctttgtagtcatggtggtcttgtatgctcatatctttggatacgtg cgccagaggactatgagaatgtcaaggcatagttcagggcctcgcaggaatcgggataccatgatgagtctcctaaagac tgttgtcatcgtgcttggtgcttttataatctgctggacaccaggattagttctgctccttcttgacgtttgctgcccac agtgcgacgtcctagcatatgaaaagttcttcttgctgcttgccgaattcaactctgccatgaaccccatcatctactct taccgggacaaagaaatgagtgccaccttcaagcagattctttgctgccagcgcagtgacagcgccaacggacccacaga aggctctgatcgctcagcctcctcactgaatcatacaattttggctggtgtgcacagcagtgatcactccgtggtctgaa caaaatcccaccaagataaatttagtgctaggtgaatgccta |
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Protein
| Protein ID | habu1_s3892_g12908.t1 |
|---|---|
| Definition | - |
>habu1_s3892_g12908.t1 MADPSAEVPFFMMTHPQIIESADMNEPQCYYNETIAFFYNQSGKTLATEWNTVSKLVMGLGITVCVFIMLANLLVMVAIY VNRRFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQL HTRMSNRRVVVVIVVIWTVAIVMGAIPSVGWNCICDLAHCSNMAPLYSDSYLVFWAVFNLVTFVVMVVLYAHIFGYVRQR TMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRD KEMSATFKQILCCQRSDSANGPTEGSDRSASSLNHTILAGVHSSDHSVV |
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