Gene
| Gene Model ID | habu1_s3892_g12911 |
|---|---|
| Locus | habu1_scaffold3892 : 413310 ... 494514 : + |
| To GenomeBrowser | habu1_scaffold3892:413310..494514 |
| Genes list of scaffold | habu1_scaffold3892 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sun domain-containing protein 3-like | GO:0007283 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3892_g12911.t1 | 1 | 1 | Sad1_UNC | 372 | 501 | 4.59626e-43 | 146.2 | 0.0 | 1.00053e-42 | 145.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3892_g12911.t1 | gi|637352209|ref|XP_008118559.1| | PREDICTED: SUN domain-containing protein 3-like [Anolis carolinensis] | 0.0 |
| habu1_s3892_g12911.t1 | gi|591381458|ref|XP_007065265.1| | PREDICTED: SUN domain-containing protein 3-like [Chelonia mydas] | 0.0 |
| habu1_s3892_g12911.t1 | gi|558138714|ref|XP_006118048.1| | PREDICTED: SUN domain-containing protein 3-like [Pelodiscus sinensis] | 0.0 |
| habu1_s3892_g12911.t1 | gi|557284386|ref|XP_006025034.1| | PREDICTED: SUN domain-containing protein 3-like [Alligator sinensis] | 0.0 |
| habu1_s3892_g12911.t1 | gi|564253029|ref|XP_006265525.1| | PREDICTED: SUN domain-containing protein 3-like [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s3892_g12911.t1 |
|---|---|
| Definition | - |
>habu1_s3892_g12911.t1 agtcgaggactaaactggtcataagtcgaggactaaaccggtcgtaagtcgaggactacccaactggtcgtaagtcgagg actttccctgcccgggagcgccgcacatgcgtggttccgccccctgtgccggccaaggcgtagctggcaagcggcagaga cggagcaggccgaccaccagctggcccagcccaagggagttttcaatcaacacctttcctgacttattgttaatttgtaa aacatgcaatatacataaaagcaaagaacgagaaaaacattctaaaaatacagtttataagtggctaaaacagtattttg aaaatggagtgatggatgggaaacgctctgtgcgaagatgtcctgctcaagcaccgccagcttttcaagataactctaat gagcaaggtagtagtaccagggcaacaagaggatcaggcaagacccagacaaacaactggtacctgcttaattcttcagg aggtgaccccaggacgtctactacctcatctagccagatgtcttcaatttacgatcagggagaagaaaatgggcgaggtt ttaccagagaagtcattgccggtgagagttgctatagccacttctcatctaattccacagcttcatctgaaaggagtacg ctgaaaaccatatgctgcattcccagccttattgtatattctgttatctgctttcttcgaaaacttttacaatcctgctg ctgtgcaagaaaccaaaatcctatggcaaactgtgtgaaatgcttgacattcctcatcatagctgtctcaatcatttatg gtaccgtttactgcatttgtcaatatctgcaattatcagatggcctatcatcaaaggaacttacaaaagtgtatgaaact gagctgaatgaactctggaaatcacaacatctgcttgaagaacaattccatgaaattcagggtcttaaaaaagagatgga tcacatgcattctgagatcagcagcatcaggaaaggcatcttacagtccacaaagcaaatccttgaggaaagtgactttc caggagagaagaaagaaatgcttgatatactccatttggcttttaagaagatttttgaagacgacatacagatggctgac tgggctcaaaaatcaataggagccacaattgataaagacaggacatccaagacgtacgattttttgcaccaggaatactg ttggtttccatttatctcctcagccaacccccccgaaactattttacagccggatgttaaccctggaaactgctgggcat tctcaggatcagagggccaagcagtaattaaactgcctgaaaaagtccaactcacagccattacagttcagcacatctct aaagcaatagctttttcggaaggaatcacaagcgcgttaaaggatttcttgatttatgggctaaatgatgaaacaaaaga ggagatcctgctgggaacattcatgtatgatactgagaaagaattaattcagacattccaactgaagaatgaacaggaga aggcgttccagtatgtaaaaatcaaagtgcagagcaactggggaaatccggagtacacctgcatttatcgagtcagggtg catggaaggatggccaatataaaccttttgggcaagcaagtggatgaaatctcccaagataaataaagaaaaacaggaat atgaacatttatactgagcaagtgtgaagagcacatagaatttgctctggcttttcccaggggagaatggaaaagaaaac acgaggacatactaatgatgttgagttatttgactaacagatttcagtttgatttcagttgaaaattcagttagattaac gcaaaggcatggagttgttaaactaatctgagttgcatgaatacttttgattctgtccaatctctcaaaaagatgagatg actggaggtgatctcccaataaatattttgtccagattataacat |
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Protein
| Protein ID | habu1_s3892_g12911.t1 |
|---|---|
| Definition | - |
>habu1_s3892_g12911.t1 MRGSAPCAGQGVAGKRQRRSRPTTSWPSPREFSINTFPDLLLICKTCNIHKSKEREKHSKNTVYKWLKQYFENGVMDGKR SVRRCPAQAPPAFQDNSNEQGSSTRATRGSGKTQTNNWYLLNSSGGDPRTSTTSSSQMSSIYDQGEENGRGFTREVIAGE SCYSHFSSNSTASSERSTLKTICCIPSLIVYSVICFLRKLLQSCCCARNQNPMANCVKCLTFLIIAVSIIYGTVYCICQY LQLSDGLSSKELTKVYETELNELWKSQHLLEEQFHEIQGLKKEMDHMHSEISSIRKGILQSTKQILEESDFPGEKKEMLD ILHLAFKKIFEDDIQMADWAQKSIGATIDKDRTSKTYDFLHQEYCWFPFISSANPPETILQPDVNPGNCWAFSGSEGQAV IKLPEKVQLTAITVQHISKAIAFSEGITSALKDFLIYGLNDETKEEILLGTFMYDTEKELIQTFQLKNEQEKAFQYVKIK VQSNWGNPEYTCIYRVRVHGRMANINLLGKQVDEISQDK |
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