Gene
| Gene Model ID | habu1_s3892_g12912 |
|---|---|
| Locus | habu1_scaffold3892 : 496160 ... 503018 : + |
| To GenomeBrowser | habu1_scaffold3892:496160..503018 |
| Genes list of scaffold | habu1_scaffold3892 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3892_g12912.t1 | 1 | 1 | NDUF_B6 | 18 | 134 | 9.4e-29 | 100.2 | 7.3e-33 | 1.1e-28 | 100.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3892_g12912.t1 | gi|602655366|ref|XP_007433432.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 [Python bivittatus] | 0.0 |
| habu1_s3892_g12912.t1 | gi|637352204|ref|XP_003227236.2| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 [Anolis carolinensis] | 2.94273e-44 |
| habu1_s3892_g12912.t1 | gi|507549236|ref|XP_004658440.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 isoform X1 [Jaculus jaculus] | 1.99965e-42 |
| habu1_s3892_g12912.t1 | gi|62858165|ref|NP_001016490.1| | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 [Xenopus (Silurana) tropicalis] | 6.00036e-42 |
| habu1_s3892_g12912.t1 | gi|530606221|ref|XP_005294822.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 [Chrysemys picta bellii] | 9.99967e-42 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 19.6 |
| Venom grand-1 | 42.2 |
| Pit, infrared sensing | 24.9 |
| Nose | 22.0 |
| Brain-1 | 14.5 |
| Eye | 22.1 |
| fetal fibroblast | 45.2 |
| venom gland-2 | 48.3 |
| Brain-2 | 17.1 |
| Spleen | 20.0 |
| Lung | 17.8 |
| Liver | 36.4 |
| Kidney | 30.6 |
| Pancreas | 61.4 |
| Small intestine | 26.9 |
| Large intestine | 34.4 |
| Stomach | 60.5 |
| heart | 114.1 |
| ovary | 28.3 |
| cheek muscle | 96.2 |
Transcript
| Transcript ID | habu1_s3892_g12912.t1 |
|---|---|
| Definition | - |
>habu1_s3892_g12912.t1 ggcattaaaaaggttgagaaccactgggttagaggaaaagtgggggggaaaatcctttcccgttcgttttaaaatacaag acgacgtggtttcaagacgcttctctagagtcgccctactccagacctgggtaaaaatgacaaaaaaattatatatgaag aaatagggggaaaaaattctatggacaaactagagcagatgccccgttcgcatagtgcaggggtaggcaacctcggctct tttatgactcatggacttcaactcccagaattcctgagccagcatagcaattctgagagttgaagtccatgagtcataaa gtgtctgatatcgtttgtcttcattcctatctctatggctgggcacgcgactcggaagtgacgtccacccctccctcctg cccaggattgtcctccacagtaaggtcgcacaggcgcagaaaggcgcggccccgcagaagtgcccgagagagacacggga gtgcaaagatgtcgcggggttcggggctgcaacccagagacctccccgaggaggtgatcggctacactccggaggagaag ctccggcgccagcagctgcgcgaactccggcgccgctggctcaaagaccaggagctgagcccccgggaacctgtccttcc cccgcggaaggtcggctgggtggaaggtttctgggagcgcttccttcagcccgagaggctgtggaagagacaggtattca atatctacaacgctggaaaatttagtttaataaatctttttattcctctctggcttgcccattatattgtcaagtatcat gtccagcttactccccatgggattgttgaaaaaaaccattcaatatatccaggagacaggacggaggaaaaaggaattcc accatctcaaggaacttcagcagaaataccattctgtgaggactgagagactcaaggacctgcaaaatgaaaaaaaaacc cagtttcctatatatatgaatatataattcaaaatggatagtaagagacttaatgatttttggctattgtggggatatgg gggaggcagcactatactggattggtctcttaaatgcagtcactaaacatgtatagatactgaatccaacaacaaagtac tttattttggttattgataggctttagaaaacacacaacttagaaacattaaaagataaaaacaaaatggaataa |
|
Protein
| Protein ID | habu1_s3892_g12912.t1 |
|---|---|
| Definition | - |
>habu1_s3892_g12912.t1 MSRGSGLQPRDLPEEVIGYTPEEKLRRQQLRELRRRWLKDQELSPREPVLPPRKVGWVEGFWERFLQPERLWKRQVFNIY NAGKFSLINLFIPLWLAHYIVKYHVQLTPHGIVEKNHSIYPGDRTEEKGIPPSQGTSAEIPFCED |
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