Gene
| Gene Model ID | habu1_s3922_g12959 |
|---|---|
| Locus | habu1_scaffold3922 : 28947 ... 41905 : - |
| To GenomeBrowser | habu1_scaffold3922:28947..41905 |
| Genes list of scaffold | habu1_scaffold3922 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3922_g12959.t1 | 2 | 1 | TPR_11 | 76 | 136 | 2.2e-25 | 88.1 | 1.3e-15 | 1.3e-12 | 47.1 |
| habu1_s3922_g12959.t1 | 1 | 1 | TPR_2 | 77 | 106 | 1.9e-15 | 55.4 | 1.4e-10 | 1.4e-07 | 30.9 |
| habu1_s3922_g12959.t1 | 1 | 1 | TPR_1 | 77 | 106 | 4.4e-14 | 51.3 | 5.7e-12 | 5.7e-09 | 35.2 |
| habu1_s3922_g12959.t1 | 2 | 1 | TPR_12 | 79 | 136 | 1.5e-10 | 40.8 | 5.3e-08 | 5.2e-05 | 23.0 |
| habu1_s3922_g12959.t1 | 1 | 1 | TPR_16 | 79 | 128 | 5.6e-07 | 30.0 | 7.0e-06 | 0.0069 | 17.0 |
| habu1_s3922_g12959.t1 | 1 | 1 | TPR_8 | 80 | 106 | 1.6e-08 | 33.6 | 1.1e-07 | 0.00011 | 21.7 |
| habu1_s3922_g12959.t1 | 1 | 1 | TPR_7 | 81 | 108 | 3.8e-09 | 35.6 | 1.7e-09 | 1.7e-06 | 27.3 |
| habu1_s3922_g12959.t1 | 2 | 2 | TPR_12 | 249 | 316 | 1.5e-10 | 40.8 | 5.7e-09 | 5.6e-06 | 26.2 |
| habu1_s3922_g12959.t1 | 2 | 2 | TPR_11 | 288 | 330 | 2.2e-25 | 88.1 | 1.9e-06 | 0.0018 | 17.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3922_g12959.t1 | gi|602657592|ref|XP_007434512.1| | PREDICTED: tetratricopeptide repeat protein 16 [Python bivittatus] | 0.0 |
| habu1_s3922_g12959.t1 | gi|591364988|ref|XP_007057392.1| | PREDICTED: tetratricopeptide repeat protein 16 [Chelonia mydas] | 0.0 |
| habu1_s3922_g12959.t1 | gi|558143982|ref|XP_006119134.1| | PREDICTED: tetratricopeptide repeat protein 16 [Pelodiscus sinensis] | 0.0 |
| habu1_s3922_g12959.t1 | gi|641764834|ref|XP_008167500.1| | PREDICTED: tetratricopeptide repeat protein 16 [Chrysemys picta bellii] | 0.0 |
| habu1_s3922_g12959.t1 | gi|557283124|ref|XP_006024447.1| | PREDICTED: tetratricopeptide repeat protein 16 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 2.5 |
| Nose | 1.9 |
| Brain-1 | 0.4 |
| Eye | 1.3 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 2.3 |
| Brain-2 | 0.5 |
| Spleen | 2.2 |
| Lung | 2.3 |
| Liver | 2.4 |
| Kidney | 2.2 |
| Pancreas | 4.2 |
| Small intestine | 1.7 |
| Large intestine | 2.6 |
| Stomach | 1.8 |
| heart | 1.2 |
| ovary | 0.7 |
| cheek muscle | 1.5 |
Transcript
| Transcript ID | habu1_s3922_g12959.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12959.t1 ttgacatagagaccaggggacacaaattacagagcggctggaggagcaatggaggaggaagaagaggtcgaagaacccaa agcaaaggtgaaggaggtgaagatgtcaactgtcgttctgacactcttccccacggctgtcactgaagaaaagcttcagg aatccaaggaaaaagccatcactcgtatttttgggcccgccaagactttgctgaaggttaaaaacccccagagagcagga gattttgaaagcattttgaagaggaaaatagacgaccactgccaagaaggtcatctttacttctcccaaggggagtggga gaaagccatcacttgctacaccaaggctctgaatctggaccccaacaaggcagaactttacgagaagaaagcggaaggtt ttctccagctttgcgacttccagtctgccgccatgcaccttcggaaggtctatcaggtcattgcctgcctggctgcgatg aaccgattcaacgattgccttcagatggtcaacgaggaggtggaactggagaagaacaacgccgatctctttgtcctgag ggctcgtctcttcgaatactttgggaaggcaagctgctgtttctgcaacatccaagaggccctggccttggatccaggcc acgtcgaagcccagctcctgttgaagaagatgaccaaggaggcggagagatcgaaagatttggcggtgagcttggccatc aaaggcaacctgaaaggtgctctgctgaagatcaaccgggccatcaattacaaccccttggatgaaaagtacttcctctt cagactgaaggacttcagtgcggccatcgacgactacctgaaagccgtcgagctgtgccgggcagacgaggccagcgagg tgcgtcacgaggccgagaagcaggtgctgctgagctacaacgactttgccgtccactgttaccacaagggctgctacgaa gaggcggtgcagctgctcaacaaagccgtcaaaggggagaaaaacgaattcggcctctacgttaaccgagggggatccga actcccaaccaacgtgtacgttcagatcgaggaccaacagaaggccgaggagccggcagccaaggaggagaaggaggagg tttctgaagaaaaaaagctgcaaaagagactggccgaatgtcagcaacattcgcaccaggccgacgaggagctgaaagaa gcacgtcaaaataagccaactctggaatccaaaacagtctggatagacccctgccctcgcctgccccccaaggaatgccc caaggaaccgttctgctggagaaaaatttaagaaggcatcgactttgcgaaagactttataaagctgtgcctttcctgtt ttgttttttttaaaatttatttaaataaagcaagcttttgaagacctcaag |
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Protein
| Protein ID | habu1_s3922_g12959.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12959.t1 MEEEEEVEEPKAKVKEVKMSTVVLTLFPTAVTEEKLQESKEKAITRIFGPAKTLLKVKNPQRAGDFESILKRKIDDHCQE GHLYFSQGEWEKAITCYTKALNLDPNKAELYEKKAEGFLQLCDFQSAAMHLRKVYQVIACLAAMNRFNDCLQMVNEEVEL EKNNADLFVLRARLFEYFGKASCCFCNIQEALALDPGHVEAQLLLKKMTKEAERSKDLAVSLAIKGNLKGALLKINRAIN YNPLDEKYFLFRLKDFSAAIDDYLKAVELCRADEASEVRHEAEKQVLLSYNDFAVHCYHKGCYEEAVQLLNKAVKGEKNE FGLYVNRGGSELPTNVYVQIEDQQKAEEPAAKEEKEEVSEEKKLQKRLAECQQHSHQADEELKEARQNKPTLESKTVWID PCPRLPPKECPKEPFCWRKI |
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