Gene
| Gene Model ID | habu1_s3922_g12960 |
|---|---|
| Locus | habu1_scaffold3922 : 43546 ... 46828 : + |
| To GenomeBrowser | habu1_scaffold3922:43546..46828 |
| Genes list of scaffold | habu1_scaffold3922 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable peptidyl-trna hydrolase | EC:3.1.1.29 GO:0004045 GO:0005739 GO:0008152 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3922_g12960.t1 | 1 | 1 | Pept_tRNA_hydro | 2 | 176 | 0.0 | 170.8 | 0.0 | 0.0 | 170.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3922_g12960.t1 | gi|602657572|ref|XP_007434502.1| | PREDICTED: probable peptidyl-tRNA hydrolase [Python bivittatus] | 0.0 |
| habu1_s3922_g12960.t1 | gi|395506181|ref|XP_003757414.1| | PREDICTED: probable peptidyl-tRNA hydrolase, partial [Sarcophilus harrisii] | 0.0 |
| habu1_s3922_g12960.t1 | gi|637376589|ref|XP_008123032.1| | PREDICTED: probable peptidyl-tRNA hydrolase [Anolis carolinensis] | 0.0 |
| habu1_s3922_g12960.t1 | gi|591364990|ref|XP_007057393.1| | PREDICTED: probable peptidyl-tRNA hydrolase [Chelonia mydas] | 0.0 |
| habu1_s3922_g12960.t1 | gi|126297639|ref|XP_001365569.1| | PREDICTED: probable peptidyl-tRNA hydrolase [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 0.9 |
| Nose | 1.4 |
| Brain-1 | 0.8 |
| Eye | 1.5 |
| fetal fibroblast | 3.6 |
| venom gland-2 | 3.4 |
| Brain-2 | 1.0 |
| Spleen | 2.4 |
| Lung | 0.6 |
| Liver | 3.3 |
| Kidney | 2.0 |
| Pancreas | 0.9 |
| Small intestine | 1.2 |
| Large intestine | 1.8 |
| Stomach | 1.4 |
| heart | 1.2 |
| ovary | 7.4 |
| cheek muscle | 2.8 |
Transcript
| Transcript ID | habu1_s3922_g12960.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12960.t1 gcgaggcggagaggccatgacgcgtcctcagcccctcagacaactcttacgctgggctctgggtcaccgcggcgacgagc tacaaaccgctcaaaaacggatgatggtggccggcctgggcaactacacgctccctggcacccggcacagcgtgggcatg gcagtgctgaaccacctggcctccaagctggacatgggtgaccagtggaagagagacaagcaatgctgcgcggacgtagt ggtggcccgcctaggagacgctgagcttctgctgatgaaacctcgcaagttcatgaacctcaatgggacctccgtggtca cagctgcggaaaagttcagccttagtattgaagatatttatctggtccacgatgatctggataagcctctggggaagatc tccctaaaactgggaggcagtgccagaggtcacaacggagtccgttcctgcatcagctgcctgcactccgaccgtatggc gcggctgaggatcggcatcggccgtccgacggggaaggcagccatagaagactacgtcctaagccagtttaccaacgcgg agcaagaggtcttgccgtccctatttgagcgggcaaccacgatcctgctccagcatcttcaacagaattgtggccaaagg gagtccccggatctctgcgatggacttgcgagccccccgcacaaaagagaaggcagggggccatctcgagccgacctata agaacggccagggaacgcagccgagtgattgtgtgtgtgtgtgtgtgtgtgtgtgtgaactgcagttgggcttgcccaat gcttgcggctttgcacaacggacaaatcttactccaagaatttagg |
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Protein
| Protein ID | habu1_s3922_g12960.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12960.t1 MMVAGLGNYTLPGTRHSVGMAVLNHLASKLDMGDQWKRDKQCCADVVVARLGDAELLLMKPRKFMNLNGTSVVTAAEKFS LSIEDIYLVHDDLDKPLGKISLKLGGSARGHNGVRSCISCLHSDRMARLRIGIGRPTGKAAIEDYVLSQFTNAEQEVLPS LFERATTILLQHLQQNCGQRESPDLCDGLASPPHKREGRGPSRADL |
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