Gene
| Gene Model ID | habu1_s3922_g12962 |
|---|---|
| Locus | habu1_scaffold3922 : 140017 ... 152075 : - |
| To GenomeBrowser | habu1_scaffold3922:140017..152075 |
| Genes list of scaffold | habu1_scaffold3922 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquinone biosynthesis protein coq4 mitochondrial | GO:0006744 GO:0031314 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3922_g12962.t1 | 1 | 1 | Coq4 | 55 | 275 | 0.0 | 318.9 | 0.0 | 0.0 | 318.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3922_g12962.t1 | gi|602656778|ref|XP_007434120.1| | PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s3922_g12962.t1 | gi|641764765|ref|XP_008167476.1| | PREDICTED: LOW QUALITY PROTEIN: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Chrysemys picta bellii] | 0.0 |
| habu1_s3922_g12962.t1 | gi|637365527|ref|XP_008121045.1| | PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s3922_g12962.t1 | gi|733914163|ref|XP_010719430.1| | PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial, partial [Meleagris gallopavo] | 0.0 |
| habu1_s3922_g12962.t1 | gi|697512386|ref|XP_009683347.1| | PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 2.5 |
| Nose | 3.4 |
| Brain-1 | 1.9 |
| Eye | 2.9 |
| fetal fibroblast | 9.7 |
| venom gland-2 | 2.8 |
| Brain-2 | 2.2 |
| Spleen | 0.8 |
| Lung | 1.6 |
| Liver | 17.1 |
| Kidney | 13.5 |
| Pancreas | 0.2 |
| Small intestine | 16.4 |
| Large intestine | 4.6 |
| Stomach | 2.8 |
| heart | 6.9 |
| ovary | 9.5 |
| cheek muscle | 4.1 |
Transcript
| Transcript ID | habu1_s3922_g12962.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12962.t1 gttgctggatggaggaatacaagttctcatcgtcttcttcctgccaaagagagaaaggaaggacctcaagagttttgcct cgtggaggaagatcccaaccatgcacaggttgctgtccagtcgtgctctgaaattcctgccttggatagggaacgtggga aatgttttggagtcctcctggctcacaggacgcccaattagccacgccagccccctctcaactttcctgagccccctgga agaagcgagccatttccccctctatccgaaccacatccccaccagcctcttgcaaaaatgcctcttgacagccggttcgg ccttcatgtccctctacaacccctatcgccacgatatggtagctgtcctgggagagacaacgggttcaatagctttaaag aatctctgggaacagatgaagaacgactcagaaggaaggcagatcctccaagagcggcctcggatccgcctttccacctt ggatgtagctggacttcgggggcttcctgacgggaccttcggccgagaatacattcgcttcctggatgataatagggtgt ctccagacacaaggatgccagcccggttcatagacgacgaagacctggcctacgtcatccagcgttaccgggaagtccat gatctgctacacacccttctcagcatgcccaccaacatgcttggcgaagtggtggtcaagtggtttgaggctgtccagac tggtctgcccatgtgcattctgggagcgctctttggtcctttacgtttaaatacccgaaagtggcggcttttgaccgggg agcttatcccgtgggccgttcagagtggacaaaacgccagctgcatcttgaatttttattacgagaagcgttgggagcaa tcggtggagtctcttcgccgtgaaattggcattttgccgcctcctgggatccatttttgagtttccgtggctgaaacaag aggaacacctgatggaggccatcccttttcaggaaactacggaattaaatccgggatattaaatcctctgg |
|
Protein
| Protein ID | habu1_s3922_g12962.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12962.t1 MHRLLSSRALKFLPWIGNVGNVLESSWLTGRPISHASPLSTFLSPLEEASHFPLYPNHIPTSLLQKCLLTAGSAFMSLYN PYRHDMVAVLGETTGSIALKNLWEQMKNDSEGRQILQERPRIRLSTLDVAGLRGLPDGTFGREYIRFLDDNRVSPDTRMP ARFIDDEDLAYVIQRYREVHDLLHTLLSMPTNMLGEVVVKWFEAVQTGLPMCILGALFGPLRLNTRKWRLLTGELIPWAV QSGQNASCILNFYYEKRWEQSVESLRREIGILPPPGIHF |
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