Gene
| Gene Model ID | habu1_s3922_g12965 |
|---|---|
| Locus | habu1_scaffold3922 : 204120 ... 245393 : - |
| To GenomeBrowser | habu1_scaffold3922:204120..245393 |
| Genes list of scaffold | habu1_scaffold3922 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3922_g12965.t1 | 1 | 1 | Dynamin_M | 1 | 60 | 4.1e-12 | 45.5 | 1.4e-15 | 6.8e-12 | 44.7 |
| habu1_s3922_g12965.t1 | 1 | 1 | PH | 75 | 173 | 5.9e-11 | 42.5 | 2.0e-14 | 9.7e-11 | 41.7 |
| habu1_s3922_g12965.t1 | 1 | 1 | GED | 210 | 299 | 1.9e-26 | 91.7 | 3.8e-30 | 1.9e-26 | 91.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3922_g12965.t1 | gi|602656793|ref|XP_007434126.1| | PREDICTED: dynamin-1 [Python bivittatus] | 0.0 |
| habu1_s3922_g12965.t1 | gi|557282954|ref|XP_006024366.1| | PREDICTED: dynamin-1 isoform X4 [Alligator sinensis] | 0.0 |
| habu1_s3922_g12965.t1 | gi|700325610|ref|XP_009928957.1| | PREDICTED: LOW QUALITY PROTEIN: dynamin-1 [Haliaeetus albicilla] | 0.0 |
| habu1_s3922_g12965.t1 | gi|697512277|ref|XP_009683303.1| | PREDICTED: dynamin-1 isoform X7 [Struthio camelus australis] | 0.0 |
| habu1_s3922_g12965.t1 | gi|704307109|ref|XP_010164763.1| | PREDICTED: LOW QUALITY PROTEIN: dynamin-1, partial [Caprimulgus carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.2 |
| Venom grand-1 | 1.9 |
| Pit, infrared sensing | 2.3 |
| Nose | 7.0 |
| Brain-1 | 63.6 |
| Eye | 21.5 |
| fetal fibroblast | 3.1 |
| venom gland-2 | 1.0 |
| Brain-2 | 94.1 |
| Spleen | 2.9 |
| Lung | 5.7 |
| Liver | 0.2 |
| Kidney | 0.3 |
| Pancreas | 0.7 |
| Small intestine | 0.3 |
| Large intestine | 0.9 |
| Stomach | 0.6 |
| heart | 0.9 |
| ovary | 0.5 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s3922_g12965.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12965.t1 ctaagccaataccctcacctgcgggaggagatggagcggatcgtgaccacttacatccgggacagagaaggaaagaccaa agaccaggtcatgcttctgatagacattgagttgtcctacatgaacaccaaccatgaagacttcattggatttgccaatg ctcagcaaaggagcagccaaatgagtaagaaaaaaacagccgggaatcaggatgagatcctggtgatccgcaagggttgg ctcacgatcaacaatatcggcatcatgaagggcggctcaaaagaatactggtttgtgctgactgcggagaatctctcgtg gtataaagacgatgaggagaaagagaaaaagtacatgctgccggtggacaacttgaaggtgcgagatatcgagaaaggct tcatgtccagcaagtacatttttgcgctgttcaacacggagcaaaggaacgtttacaaagattatcgtcaactggagctg gcgtgcgaaacacaggaggaggtagacagttggaaggcttccttcctgcgggctggagtttacccagaacgtgttgggga caaagataaaggtggggagtcagaagagaacggctcggacagcttaatgcattcaatggatccccagttggagaggcaag tggaaacgatccggaaccttgttgattcctacatggccatcgtcaacaagaccatccgtgacctcatgcccaagacaatc atgcaccttatgataaacaataccaaggagttcattcattccgagctgctcgccaacctctactcctgtggtgaccagaa caccctcatggaagagtcggccgaacaagcccagcgacgtgacgagatgctgcgcatgtatcacgccctgagagaggccc ttaacatcatcggggacatcaacaccaccaccatcagcaccccgctgcctccgccggtggacgactcttggctgcaggtg cagaacataccgtccggacgcaggtctcccacctccagccccacgccacagaggagagcaccggcagtcccacccaccag acctggatcacgaggaccagctcctggacctccgcctgttggtggacccagcctcggtggtgctccccctgtgccttcca ggccgggggcctctcctgatccttttgggcctcccccacaagtcccctcgcggcccaaccgtgcgcctccgggggtccca agaatcactatcactgacccttgaggactggccgagaccgccgcaagggtcccgcttcacctacacgagccacattaatc cgatcagctgaatcttccctcttagatttataacccaaggcctgtagacagctggtgacaagttccccctgcctgggttt ccctctactctgtcaacccagaatccacccgaggcatctcctcggctcctctgccccttcctccatgtggtttaaaaaaa aaaaatgctcgtttagtgattgaccactttgtcttcttttgtgtgtccgtattgcttgtgagcctagagtagtcctagtt gaagggcatgaattgtgaatgccgttgagttctccggagcgtagacttacaggagcatccatgcctcaacgtacccaact catcttgggttcggtgtcctgcctgcctgggtcaactgtagtcctaatccgtagcaacgtagtcccttttgtccccttac tgtagtaaagacagaaacatttgggtcttgt |
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Protein
| Protein ID | habu1_s3922_g12965.t1 |
|---|---|
| Definition | - |
>habu1_s3922_g12965.t1 LSQYPHLREEMERIVTTYIRDREGKTKDQVMLLIDIELSYMNTNHEDFIGFANAQQRSSQMSKKKTAGNQDEILVIRKGW LTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLPVDNLKVRDIEKGFMSSKYIFALFNTEQRNVYKDYRQLEL ACETQEEVDSWKASFLRAGVYPERVGDKDKGGESEENGSDSLMHSMDPQLERQVETIRNLVDSYMAIVNKTIRDLMPKTI MHLMINNTKEFIHSELLANLYSCGDQNTLMEESAEQAQRRDEMLRMYHALREALNIIGDINTTTISTPLPPPVDDSWLQV QNIPSGRRSPTSSPTPQRRAPAVPPTRPGSRGPAPGPPPVGGPSLGGAPPVPSRPGASPDPFGPPPQVPSRPNRAPPGVP RITITDP |
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