Gene
| Gene Model ID | habu1_s3970_g13007 |
|---|---|
| Locus | habu1_scaffold3970 : 384726 ... 396137 : + |
| To GenomeBrowser | habu1_scaffold3970:384726..396137 |
| Genes list of scaffold | habu1_scaffold3970 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 2 subunit 1 | GO:0003743 GO:0005634 GO:0005840 GO:0005850 GO:0005851 GO:0010494 GO:0016020 GO:0043022 GO:0043558 GO:0044822 GO:0046777 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3970_g13007.t1 | 1 | 1 | S1 | 14 | 88 | 3.0e-15 | 56.0 | 1.0e-18 | 7.4e-15 | 54.7 |
| habu1_s3970_g13007.t1 | 1 | 1 | EIF_2_alpha | 130 | 243 | 5.9e-37 | 125.8 | 1.6e-40 | 1.2e-36 | 124.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3970_g13007.t1 | gi|602635383|ref|XP_007424558.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 1 [Python bivittatus] | 0.0 |
| habu1_s3970_g13007.t1 | gi|558117859|ref|XP_006113467.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 1 [Pelodiscus sinensis] | 0.0 |
| habu1_s3970_g13007.t1 | gi|327280334|ref|XP_003224907.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 1 [Anolis carolinensis] | 0.0 |
| habu1_s3970_g13007.t1 | gi|530639940|ref|XP_005306744.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3970_g13007.t1 | gi|149578534|ref|XP_001505360.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 1 [Ornithorhynchus anatinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 32.6 |
| Venom grand-1 | 56.6 |
| Pit, infrared sensing | 34.7 |
| Nose | 30.8 |
| Brain-1 | 22.9 |
| Eye | 35.5 |
| fetal fibroblast | 123.6 |
| venom gland-2 | 67.7 |
| Brain-2 | 29.6 |
| Spleen | 31.7 |
| Lung | 47.7 |
| Liver | 41.9 |
| Kidney | 46.3 |
| Pancreas | 42.3 |
| Small intestine | 36.0 |
| Large intestine | 45.5 |
| Stomach | 53.3 |
| heart | 64.7 |
| ovary | 169.9 |
| cheek muscle | 78.3 |
Transcript
| Transcript ID | habu1_s3970_g13007.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13007.t1 ttgcgagtggggnnnnnnnnnnnnnnnnnngagagcggacaggatgcccggattaagctgtagattttaccagcataaat ttcctgaagtagaagatgttgtcatggtcaatgtcaggtccattgcagaaatgggagcctatgttagtcttttggaatat aacaacattgagggcatgatcttactcagtgagctgtccaggagacgaatccgttctataaacaaactcatccgaattgg cagaaatgaatgtgttgttgtcataagagttgataaggagaaaggttatattgacctgtcaaaaagaagagtgtctccgg aggaggcaattaaatgtgaagacaaattcaccaaatcaaaaactgtttatagcatccttcgccatgttgctgaagttcta gaatacacaaaagatgaacagctggagagcttgtttcagagaactgcttgggtatttgatgacaaatacaaaaagcctgg atacggcgcatatgatgccttcaaacttgctgtctctgatcccgcaatccttgatggtctggatttgacagaagatgaaa agcgtgtgctaattgacaatatcaatagacgtttgacaccacaggcagtcaaaattcgagcagatattgaagtagcctgt tatggttatgagggtatagatgcagtaaaggaagctctgcgagctggcctaagctgttctacagagagtatgccaatcaa aataaatcttatagctcctcctcgatatgtgatgaccacaacaacacttgaaaggactgaaggtctttctgttctcagcc aagccatgactgtcattaaagaaaaaattgaagagaagagaggtgtctttaatgtgcaaatggaacccaaggtagtaact gacactgatgagactgaacttgcaaggcagttggaaaggttggagcgtgagaatgctgaagtggatggagatgatgatgc tgaggagatggaagcaaaaactgaagattaaattcattggaatgacaaaatagatggaaattatgccttcatatgcctaa aaacacctagagttgactgagatgtcattgttaaaaatgccacaggaacagacttgaaatgctttcaagtttttaatgag accaaattttgaatagacaagaaaccattcgctacagtaggttgcttgatttttctcaatgggaaggtacttctcactga agagtaaaaccttttcccctaaataatccaagcatactttgatgactcttcttaaaattttcacatcttatacattcaga ttggcaactggttcactatgttgtatcagtgagtttctgaggattaaaccaatattcttccacagactgcactgaagctt tcaataaatgtattggatatttacttggat |
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Protein
| Protein ID | habu1_s3970_g13007.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13007.t1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEK GYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKKPGYGAYDAFKLAVSDP AILDGLDLTEDEKRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLSCSTESMPIKINLIAPPRYVMTTT TLERTEGLSVLSQAMTVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLERENAEVDGDDDAEEMEAKTED |
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