Gene
| Gene Model ID | habu1_s3970_g13008 |
|---|---|
| Locus | habu1_scaffold3970 : 397626 ... 416159 : + |
| To GenomeBrowser | habu1_scaffold3970:397626..416159 |
| Genes list of scaffold | habu1_scaffold3970 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pleckstrin-2 isoform x1 | GO:0035556 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3970_g13008.t1 | 2 | 1 | PH | 8 | 104 | 2.9e-35 | 120.5 | 1.3e-19 | 2.8e-16 | 59.6 |
| habu1_s3970_g13008.t1 | 2 | 1 | PH_11 | 9 | 97 | 1.9e-13 | 50.6 | 1.6e-09 | 3.3e-06 | 27.3 |
| habu1_s3970_g13008.t1 | 1 | 1 | PH_9 | 46 | 98 | 8.7e-08 | 32.3 | 6.5e-06 | 0.014 | 15.5 |
| habu1_s3970_g13008.t1 | 1 | 1 | DEP | 144 | 225 | 6.3e-15 | 54.6 | 8.0e-18 | 1.7e-14 | 53.3 |
| habu1_s3970_g13008.t1 | 2 | 2 | PH | 251 | 354 | 2.9e-35 | 120.5 | 2.1e-19 | 4.5e-16 | 58.9 |
| habu1_s3970_g13008.t1 | 2 | 2 | PH_11 | 252 | 352 | 1.9e-13 | 50.6 | 1.2e-06 | 0.0024 | 18.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3970_g13008.t1 | gi|602635381|ref|XP_007424557.1| | PREDICTED: pleckstrin-2-like [Python bivittatus] | 0.0 |
| habu1_s3970_g13008.t1 | gi|327280332|ref|XP_003224906.1| | PREDICTED: pleckstrin-2 [Anolis carolinensis] | 0.0 |
| habu1_s3970_g13008.t1 | gi|719733996|ref|XP_010221126.1| | PREDICTED: pleckstrin-2 [Tinamus guttatus] | 0.0 |
| habu1_s3970_g13008.t1 | gi|697461523|ref|XP_009667164.1| | PREDICTED: pleckstrin-2 isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s3970_g13008.t1 | gi|557276672|ref|XP_006021462.1| | PREDICTED: pleckstrin-2-like [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.7 |
| Venom grand-1 | 1.1 |
| Pit, infrared sensing | 2.2 |
| Nose | 4.3 |
| Brain-1 | 0.6 |
| Eye | 1.7 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.8 |
| Brain-2 | 0.4 |
| Spleen | 0.4 |
| Lung | 1.7 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 2.2 |
| Small intestine | 8.6 |
| Large intestine | 1.8 |
| Stomach | 4.0 |
| heart | 0.0 |
| ovary | 17.6 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s3970_g13008.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13008.t1 gagtttgacacccctgatctagatattgtcagcattagaaatgtcaggacaaacacaaaaatgactccgctgtaatagaa aactataaattgaacagtaataaaagaactgggatgcagggaaagataataggcatggaggaagggagggggatcctgaa agagggctttctagttaaaaagggtcacgttgtccccaattggaaaacaaggtggtttgttcttctccaggacaggctgc tctattataaagttgtgggaggaaagcaggagtcttctcccaagggaaagatttttctggatggctgtacgattacttgc ccgtgtttggaatatgagaacaggccgttagttattaagctaaggacaaaaaccaacaccgactatttccttgactgttg ctctcgagaagagcgtgacatttgggctttggatatcactggcgctattcatgctggcaatccagtgcaagttcagcaac ttcacctcatgagaaactccttcaaacttcctacgaacatcagtctgaatcatattgtggacaaaatgtatgacagcagc agcggaatcaagataacacccaacacaggacaaggcagcttgtataaagaaagctttacaggctccatactagtagactg gttgatttccaatagctttgcagcttctcggcttgaagcagtcacgctggcttctgtgctgatggaagaaaatttcatta aacctgtgggagttcgcagcactgaagccatgaggaatggagatttgactgagcaatttttagatgactctactgccttg tatgcatttgctgaaaactataagaaaaaagttaatactaaagaacatctcagtattaacatacttgaactgagtggcac aattttaaagcaaggctttttgataaaacaggggcacaagaggaagaactggaaagtcaggcgctttgtcctgaggtctg atcctgctttcttacactattatgaccccacaaaggaagataacaaaccagtggggggattttctctccgtggttgcctt atttcagcactggaagacaatggagtcccaacaggagtgaaaggaaatgtgcagggcaacctcttcaaaattattacaaa gaatgacattcactactacatacaggctagttccaaggcagaaagagctaactggattgaagccatcaagccgctaacat aggagatgaaccaaagtgcatttatgggacagtataataccgtatctgggacattaaaaggggctgctttttgaaattgc |
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Protein
| Protein ID | habu1_s3970_g13008.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13008.t1 MEEGRGILKEGFLVKKGHVVPNWKTRWFVLLQDRLLYYKVVGGKQESSPKGKIFLDGCTITCPCLEYENRPLVIKLRTKT NTDYFLDCCSREERDIWALDITGAIHAGNPVQVQQLHLMRNSFKLPTNISLNHIVDKMYDSSSGIKITPNTGQGSLYKES FTGSILVDWLISNSFAASRLEAVTLASVLMEENFIKPVGVRSTEAMRNGDLTEQFLDDSTALYAFAENYKKKVNTKEHLS INILELSGTILKQGFLIKQGHKRKNWKVRRFVLRSDPAFLHYYDPTKEDNKPVGGFSLRGCLISALEDNGVPTGVKGNVQ GNLFKIITKNDIHYYIQASSKAERANWIEAIKPLT |
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