Gene
| Gene Model ID | habu1_s3970_g13009 |
|---|---|
| Locus | habu1_scaffold3970 : 421957 ... 427585 : - |
| To GenomeBrowser | habu1_scaffold3970:421957..427585 |
| Genes list of scaffold | habu1_scaffold3970 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| galectin-related protein partial | GO:0030246 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3970_g13009.t1 | 1 | 1 | Gal-bind_lectin | 2 | 121 | 1.7e-28 | 98.5 | 1.3e-32 | 1.9e-28 | 98.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3970_g13009.t1 | gi|602635377|ref|XP_007424555.1| | PREDICTED: galectin-related protein A-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3970_g13009.t1 | gi|677767696|ref|XP_009082866.1| | PREDICTED: galectin-related protein A-like [Acanthisitta chloris] | 0.0 |
| habu1_s3970_g13009.t1 | gi|591358678|ref|XP_007054320.1| | PREDICTED: galectin-related protein A-like [Chelonia mydas] | 0.0 |
| habu1_s3970_g13009.t1 | gi|704244098|ref|XP_010145755.1| | PREDICTED: galectin-related protein A-like [Eurypyga helias] | 0.0 |
| habu1_s3970_g13009.t1 | gi|663242720|ref|XP_008497039.1| | PREDICTED: galectin-related protein A-like [Calypte anna] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 2.0 |
| Nose | 0.4 |
| Brain-1 | 1.4 |
| Eye | 1.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.3 |
| Spleen | 0.5 |
| Lung | 6.6 |
| Liver | 1.4 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 7.8 |
| Large intestine | 0.8 |
| Stomach | 0.0 |
| heart | 2.6 |
| ovary | 1.0 |
| cheek muscle | 0.8 |
Transcript
| Transcript ID | habu1_s3970_g13009.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13009.t1 cctctttattctttcttttttgtttcttatgtggatgtacaaaaacaggaacaaaagtttttggattatttctaaggaac agagcaagtaaaaaaatgacagaaaatgacaggtgcacaaatgtagagaaatatgccggtgaaattaagggaggactgag gccaactatgaaaatcactatcatgggcatgatatatcctagtccgaaaagtttttcagtggctttgctttgtgacccca aggatgatcacacaaccagggatattggattattacttgtagtcagctttagtgagaaatccattgtacggaattcgcaa attgctgggaaatggggcaaggaggaaaagaccattccctacttcccatttacagcagacgactcatttaagatggaact tttatgtgaacatcagcaaatccgaatcctgcttgatgggcgtcagttgtgcagtttcagtcaccgcgtgcagcccatgc aaaggatgactgttttgcaaatctcaggcgatctcaagcttaccaaggtggcttgaagaaaataataaatcaaaaatgcc cttcccaatgttgagctacaacactcagcaatcctaggcaaaatgactaactacaaaagatactaggagttttaacccaa cgtctggagggtcataaattctccatctctataataaataattccatatcattactgctt |
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Protein
| Protein ID | habu1_s3970_g13009.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13009.t1 MKITIMGMIYPSPKSFSVALLCDPKDDHTTRDIGLLLVVSFSEKSIVRNSQIAGKWGKEEKTIPYFPFTADDSFKMELLC EHQQIRILLDGRQLCSFSHRVQPMQRMTVLQISGDLKLTKVA |
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