Gene
| Gene Model ID | habu1_s3970_g13018 |
|---|---|
| Locus | habu1_scaffold3970 : 726342 ... 839861 : + |
| To GenomeBrowser | habu1_scaffold3970:726342..839861 |
| Genes list of scaffold | habu1_scaffold3970 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna repair protein rad51 homolog 2 isoform x6 | GO:0000166 GO:0006259 GO:0043566 GO:0044446 GO:0044763 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3970_g13018.t1 | gi|327280368|ref|XP_003224924.1| | PREDICTED: DNA repair protein RAD51 homolog 2 isoform X6 [Anolis carolinensis] | 0.0 |
| habu1_s3970_g13018.t1 | gi|637333841|ref|XP_008115163.1| | PREDICTED: DNA repair protein RAD51 homolog 2 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s3970_g13018.t1 | gi|637333837|ref|XP_008115162.1| | PREDICTED: DNA repair protein RAD51 homolog 2 isoform X1 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 2.1 |
| Pit, infrared sensing | 2.3 |
| Nose | 2.7 |
| Brain-1 | 0.2 |
| Eye | 1.5 |
| fetal fibroblast | 3.9 |
| venom gland-2 | 2.4 |
| Brain-2 | 0.5 |
| Spleen | 1.9 |
| Lung | 1.6 |
| Liver | 6.3 |
| Kidney | 1.6 |
| Pancreas | 2.2 |
| Small intestine | 2.0 |
| Large intestine | 2.0 |
| Stomach | 2.0 |
| heart | 3.7 |
| ovary | 11.7 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s3970_g13018.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13018.t1 gacccaggcacccatcagggagatctgtagggtggcaacatggtcctcgccttcatcctttgtcaggcactacaagattg acaaatatgcctcctcggatgcctcgtttggtcgcagggtgttgcaacaggttctatcaaccagcgggacccaggcccaa acggtttcccacccttagggacaacagggctttggtatgtcccatttgtggattctccatccaatcatgctggagaaggg gcgttgtcttacctgaacgccttttctcagcatgatgatggagaatccactccctcccgttaaggtaatcttgacgaatc agattactacatggctaagtgatggccttgctgtacaggcagacctcctgtctccagttgatgacttgtccctgtctgaa ggatcttctagaaatggagatggggattctggctacgtgactgcggcattgggaaacacatggagtcattgcgtcaatac aagactcattttacagtatttcgattcaaagacaagacagatcctggttgctaagacccctattgctccattgacatctt tcctatacattattgaaaattctggtttggttctccaagttgttgagttagtagcacagttgttaagtgaatctggcttc cccattgaccctgcttgtcagaagtttgcaaaagctgatcacatgaccccaggacacggcagctgtcacaaatatgagcc agttgccaagcatccgaattttgatcacgtgaccacggggatgctgcaacagttgtaagtgtgaaaaacagtcataagtc actttttcagtgctgttataactttgaatggtcactaaatgaactgctgtaagtcgaggactacctgtactatggaagat tcagtcttgtctcatgcagaaataaaattttatgcaaaatataagaaa |
|
Protein
| Protein ID | habu1_s3970_g13018.t1 |
|---|---|
| Definition | - |
>habu1_s3970_g13018.t1 MMMENPLPPVKVILTNQITTWLSDGLAVQADLLSPVDDLSLSEGSSRNGDGDSGYVTAALGNTWSHCVNTRLILQYFDSK TRQILVAKTPIAPLTSFLYIIENSGLVLQVVELVAQLLSESGFPIDPACQKFAKADHMTPGHGSCHKYEPVAKHPNFDHV TTGMLQQL |
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