Gene
| Gene Model ID | habu1_s3971_g13021 |
|---|---|
| Locus | habu1_scaffold3971 : 6017 ... 9375 : - |
| To GenomeBrowser | habu1_scaffold3971:6017..9375 |
| Genes list of scaffold | habu1_scaffold3971 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein c3h1 type-like 1 | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3971_g13021.t1 | 1 | 1 | Tis11B_N | 1 | 84 | 5.1e-33 | 113.5 | 2.9e-36 | 1.1e-32 | 112.4 |
| habu1_s3971_g13021.t1 | 2 | 1 | zf-CCCH | 91 | 116 | 7.1e-25 | 86.1 | 5.1e-16 | 1.9e-12 | 46.5 |
| habu1_s3971_g13021.t1 | 2 | 2 | zf-CCCH | 129 | 154 | 7.1e-25 | 86.1 | 1.4e-15 | 5.3e-12 | 45.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3971_g13021.t1 | gi|602635531|ref|XP_007424631.1| | PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Python bivittatus] | 0.0 |
| habu1_s3971_g13021.t1 | gi|729751714|ref|XP_010572478.1| | PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s3971_g13021.t1 | gi|591358667|ref|XP_007054315.1| | PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Chelonia mydas] | 0.0 |
| habu1_s3971_g13021.t1 | gi|564255043|ref|XP_006266500.1| | PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Alligator mississippiensis] | 0.0 |
| habu1_s3971_g13021.t1 | gi|558195771|ref|XP_006130342.1| | PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 57.4 |
| Venom grand-1 | 20.8 |
| Pit, infrared sensing | 64.1 |
| Nose | 39.8 |
| Brain-1 | 9.3 |
| Eye | 25.2 |
| fetal fibroblast | 93.2 |
| venom gland-2 | 13.9 |
| Brain-2 | 6.6 |
| Spleen | 53.5 |
| Lung | 45.5 |
| Liver | 71.6 |
| Kidney | 50.4 |
| Pancreas | 19.4 |
| Small intestine | 49.6 |
| Large intestine | 37.7 |
| Stomach | 28.0 |
| heart | 13.7 |
| ovary | 41.7 |
| cheek muscle | 9.4 |
Transcript
| Transcript ID | habu1_s3971_g13021.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13021.t1 gtcggctccctccgcctctcatttaaatgaagttaggactcctcccacggcgtaagagctgaaactttataaatcgagct ttttggtaagttcttctggaagggacgagaaaggggaattgttggagctggagggggcaaaaagggagtccgtcccaggg aaactggaggctgtgccttacaacactgaatcatttcgtttttctttttttaaagagttactccgatttttttttttttt gtcattcctctttttaactagttgaagatgtctacagccctcgtgtctccaacaatcttcgacttgagtgaagttttatg caaaagtaacaagatgctgaattacagcccctctgctgctggagggtgtcttttggacaggaaggcggtgggaactccgg ctggcgggagtttccccaggaggcattctgtcaccctgcccaattctaagttccatcagacccaactcctgaacggcctt aagggagagccagccccagccttggggcccagggagaaccgctttcgagatcgctccttctccgaaggtggagagcgcct gcttcagcaaaagcagcccggtgggcaagtcaactcaagtcgctacaagacggagctctgccgcccgtttgaggagaatg ggacctgcaaatacggagacaagtgccagtttgctcacggcatccatgagctgcgaagtttgacccgccatcccaagtac aagacggagctctgtcgcactttccataccattggcttctgcccttatgggcctcgctgtcatttcatccacaatgctga ggagcgccgggctgtagctggtggcggtcgagagcctatgattgctgaaagaccccgcctccaacacagtttcagctttg ctggcttcccaagtgctgttgctgccaatgggctgctggacagccccacctcaataacccctccgcccatcataagtgct gatgacctcctgggttctcctactctgcctgactgtgccagcaatccattcaccttctccagccaggagctgaccaatct ctttgctcctagtatgggggtgcaggtgcctggggggggctcacccactgctttccttcttagatccatgtctgagtccc caaacatgtttgactctcctccgagtccacagggctccctctctgaccaggaaggttatctgagcagctctagcagtagc cacagtggctcggattcgcctatcctggacacctcaagacgtcttcccatcttcagcagactgtccatctctgacgaata aatctggtattgccttttggcctcttcccacatgtattacaatgttaagcttgtagccccctttctctcctaaacctccc ttagcatctttgggtttgatgttaactccaaggttgtccacctgcctagagtccagacactggctgaaaccgcaagtgcc aaattacgaaaaaagtgataacgtttacaagtgtagtgccttttaatatgttcactgtgactatattacctctccagctg cagagggcaccagcagcatctatagagctctgcatttccagatgtgcaggaatatctagaactataacaactcctgtcat gagcagtagttcagatgcagaaacctcttccctttctttgtcttcccttcctttgcctgtgttcggtagacatatggcag gtggacatctgttaacatccagccccttccacattttataaaggcttgttgcctgaatcaactc |
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Protein
| Protein ID | habu1_s3971_g13021.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13021.t1 MLNYSPSAAGGCLLDRKAVGTPAGGSFPRRHSVTLPNSKFHQTQLLNGLKGEPAPALGPRENRFRDRSFSEGGERLLQQK QPGGQVNSSRYKTELCRPFEENGTCKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRA VAGGGREPMIAERPRLQHSFSFAGFPSAVAANGLLDSPTSITPPPIISADDLLGSPTLPDCASNPFTFSSQELTNLFAPS MGVQVPGGGSPTAFLLRSMSESPNMFDSPPSPQGSLSDQEGYLSSSSSSHSGSDSPILDTSRRLPIFSRLSISDE |
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