Gene
| Gene Model ID | habu1_s3971_g13023 |
|---|---|
| Locus | habu1_scaffold3971 : 66182 ... 83485 : - |
| To GenomeBrowser | habu1_scaffold3971:66182..83485 |
| Genes list of scaffold | habu1_scaffold3971 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine arginine-rich splicing factor 5-like | GO:0000166 GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3971_g13023.t3 | 1 | 1 | RRM_1 | 6 | 67 | 2.3e-18 | 65.5 | 1.5e-21 | 3.6e-18 | 64.9 |
| habu1_s3971_g13023.t3 | 1 | 1 | RRM_6 | 6 | 67 | 1.2e-10 | 41.1 | 7.7e-14 | 1.9e-10 | 40.5 |
| habu1_s3971_g13023.t3 | 1 | 1 | RRM_5 | 23 | 71 | 3.6e-09 | 36.3 | 2.2e-11 | 5.4e-08 | 32.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 49.2 |
| Venom grand-1 | 47.3 |
| Pit, infrared sensing | 48.8 |
| Nose | 56.8 |
| Brain-1 | 35.6 |
| Eye | 42.8 |
| fetal fibroblast | 76.2 |
| venom gland-2 | 61.5 |
| Brain-2 | 37.7 |
| Spleen | 49.7 |
| Lung | 51.6 |
| Liver | 72.7 |
| Kidney | 62.3 |
| Pancreas | 57.0 |
| Small intestine | 50.8 |
| Large intestine | 44.6 |
| Stomach | 47.9 |
| heart | 57.9 |
| ovary | 50.9 |
| cheek muscle | 42.0 |
Transcript
| Transcript ID | habu1_s3971_g13023.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13023.t1 gcgctaaagggtctgcgcaggcgcagttcccttgcttgccgcttctcttaagggaagtagcgccgccattttctctggcg gactgaagtgaacgttgcggttccgcacgggtgaaacgagtttccttaagcgctgccattgctgtgagcgtcggtctcct ttcaggcgatagagcggagacgaaggcggaggcggaagcgaagcttggaagagaatgagtggctgtcgtgtctttgttgg acgtttaagtccccatgctcgggaacgagatgtagagaaattttttaaaggatatggccgtatacgtgagattaatctca aaaatggctttggttttgtggaatttgaggatcacagagatgcagatgatgcagtttatgaattgaatggcaaagagctg tgtaatgaaagggtcacaattgaacatgccagagcccgaagagggggtaggggcagatacccacaacggttcaattatta ccagtcttatgggggtggatctagtcagtatggtccacctcttcgtactgaacacagacttatagtggaaaatctttctt cacgtgtcagctggcaggatttgaaagacttcatgaggaaagctggggaagttacttttgtggatgctcacagaaacaat ccaaatgaaggagtggtagagtttgcatcatccagtgacatgaagagtgcaatggataaattggatggcagtgagttaaa tggacgtagaattaaactaattgaagatcgcaaaagacgcaggagccgatctcgttctcgaagttattcaaggtctcgca gcaagtcaagatctgcgagatcctctaagtcaaccagcaagtctcgttctagaagccgcacccctgaaaaaaggagctct cgaagccgtacacctgaaagaaaaggctctgaaaaaaaccactctggcacgcagaattcctctccatctcctccgccaaa gaagaggtctcgctctaggtcaagttcagctgaaagctgcacttaaagagatattttgagaaatgtatagatgtttaatt tccaaatcaaattttctacaagcttaaataagttgtggatgggggtgttctcaaatgagcacagacatccgaagtgtgca cgtaggtaggtaaattgtaaacagtaaaaaaaaaaaaaccccaataaattggcaaattataattactcaaatgtactatg cactgtgttgaggccttgctgaataaagtaggacacattgggagtgttttcttcattggtgtattcaatgaatttaagac ctagactgtggtgttgcttttcagagtcctttgtgctttgcacattgattgttttgtacttagcaaccagtaaaccaagc aaccagactaccaatgtgaagtttgaaggtggacctagcagctctgtttaatagtgcacagaaaagtatgttgatcttga ataattagttgcttatactacactaatatttatataccaaaatagcaaatgtcagaaatgtttaatgttaccaggttaac ttgcaatacattttggaatgctagtttaaattggttgagaagcgtgtttccactttgagtttgctctggactggtaataa atttttcataatattccaattag |
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| Transcript ID | habu1_s3971_g13023.t2 |
| Definition | - |
>habu1_s3971_g13023.t2 gcgctaaagggtctgcgcaggcgcagttcccttgcttgccgcttctcttaagggaagtagcgccgccattttctctggcg gactgaagtgaacgttgcggttccgcacgggtgaaacgagtttccttaagcgctgccattgctgtgagcgtcggtctcct ttcaggcgatagagcggagacgaaggcggaggcggaagcgaagcttggaagagaatgagtggctgtcgtgtctttgttgg acgtttaagtccccatgctcgggaacgagatgtagagaaattttttaaaggatatggccgtatacgtgagattaatctca aaaatggctttggttttgtggaatttgaggatcacagagatgcagatgatgcagtttatgaattgaatggcaaagagctg tgtaatgaaagggtcacaattgaacatgccagagcccgaagagggggtaggggcagatacccacaacggttcaattatta ccagtcttatgggggtggatctagtcagtatggtccacctcttcgtactgaacacagacttatagtggaaaatctttctt cacgtgtcagctggcagccttgctttgggtacctgcttatatcatctgaccgcttgtggtatgttatggatttgaaagac ttcatgaggaaagctggggaagttacttttgtggatgctcacagaaacaatccaaatgaaggagtggtagagtttgcatc atccagtgacatgaagagtgcaatggataaattggatggcagtgagttaaatggacgtagaattaaactaattgaagatc gcaaaagacgcaggagccgatctcgttctcgaagttattcaaggtctcgcagcaagtcaagatctgcgagatcctctaag tcaaccagcaagtctcgttctagaagccgcacccctgaaaaaaggagctctcgaagccgtacacctgaaagaaaaggctc tgaaaaaaaccactctggcacgcagaattcctctccatctcctccgccaaagaagaggtctcgctctaggtcaagttcag ctgaaagctgcacttaaagagatattttgagaaatgtatagatgtttaatttccaaatcaaattttctacaagcttaaat aagttgtggatgggggtgttctcaaatgagcacagacatccgaagtgtgcacgtaggtaggtaaattgtaaacagtaaaa aaaaaaaaaccccaataaattggcaaattataattactcaaatgtactatgcactgtgttgaggccttgctgaataaagt aggacacattgggagtgttttcttcattggtgtattcaatgaatttaagacctagactgtggtgttgcttttcagagtcc tttgtgctttgcacattgattgttttgtacttagcaaccagtaaaccaagcaaccagactaccaatgtgaagtttgaagg tggacctagcagctctgtttaatagtgcacagaaaagtatgttgatcttgaataattagttgcttatactacactaatat ttatataccaaaatagcaaatgtcagaaatgtttaatgttaccaggttaacttgcaatacattttggaatgctagtttaa attggttgagaagcgtgtttccactttgagtttgctctggactggtaataaatttttcataatattccaattag |
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| Transcript ID | habu1_s3971_g13023.t3 |
| Definition | - |
>habu1_s3971_g13023.t3 gcgctaaagggtctgcgcaggcgcagttcccttgcttgccgcttctcttaagggaagtagcgccgccattttctctggcg gactgaagtgaacgttgcggttccgcacgggtgaaacgagtttccttaagcgctgccattgctgtgagcgtcggtctcct ttcaggcgatagagcggagacgaaggcggaggcggaagcgaagcttggaagagaatgagtggctgtcgtgtctttgttgg acgtttaagtccccatgctcgggaacgagatgtagagaaattttttaaaggatatggccgtatacgtgagattaatctca aaaatggctttggttttgtggaatttgaggatcacagagatgcagatgatgcagtttatgaattgaatggcaaagagctg tgtaatgaaagggtcacaattgaacatgccagagcccgaagagggggtaggggcagatacccacaacggttcaattatta ccagtcttatgggggtggatctagtgaaattgctgcagtaggaatgatccaagatctggatattctgaaaaagggggcat ttagagtcagtatggtccacctcttcgtactgaacacagacttatagtggaaaatctttcttcacgtgtcagctggcagg atgtttcgtgcattatgttatctgtattctgaaagggacttgtggcttacagtgagtagctaacatgattttaaatatcc aatttgtgcatgtatttgggcataagtattgtcagtgaaacaaactgtttggggttgtttttggatagtcatttgggaga gaaagtttaaaccgcaggtttgtttttctctaacatgtccttgagctggtgtatttcttctactaatgggattgttctgg cccttaacaactgtttggaattacctaaaactttttttttaaacaaaccctatacccccctcaacaggtttgtaaaaaaa tatatgatgttacctttcattctcccattcaattttgaaaaaatagcattcaagttactaagccattcttctccaacctt ctatttctgtatgtgcttcttatagcataaattctgttgtcagtgtataaaaaagtatacacttccccaaaaaattaaaa atagaactgctgattatgctagattgaaagaatggatgttaagagggcagaagtaggaaaacttattaaattgtaaatct gtattatatttt |
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Protein
| Protein ID | habu1_s3971_g13023.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13023.t1 MSGCRVFVGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARARRGGRG RYPQRFNYYQSYGGGSSQYGPPLRTEHRLIVENLSSRVSWQDLKDFMRKAGEVTFVDAHRNNPNEGVVEFASSSDMKSAM DKLDGSELNGRRIKLIEDRKRRRSRSRSRSYSRSRSKSRSARSSKSTSKSRSRSRTPEKRSSRSRTPERKGSEKNHSGTQ NSSPSPPPKKRSRSRSSSAESCT |
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| Protein ID | habu1_s3971_g13023.t2 |
| Definition | - |
>habu1_s3971_g13023.t2 MSGCRVFVGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARARRGGRG RYPQRFNYYQSYGGGSSQYGPPLRTEHRLIVENLSSRVSWQPCFGYLLISSDRLWYVMDLKDFMRKAGEVTFVDAHRNNP NEGVVEFASSSDMKSAMDKLDGSELNGRRIKLIEDRKRRRSRSRSRSYSRSRSKSRSARSSKSTSKSRSRSRTPEKRSSR SRTPERKGSEKNHSGTQNSSPSPPPKKRSRSRSSSAESCT |
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| Protein ID | habu1_s3971_g13023.t3 |
| Definition | - |
>habu1_s3971_g13023.t3 MSGCRVFVGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARARRGGRG RYPQRFNYYQSYGGGSSEIAAVGMIQDLDILKKGAFRVSMVHLFVLNTDL |
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