Gene
| Gene Model ID | habu1_s3971_g13026 |
|---|---|
| Locus | habu1_scaffold3971 : 278816 ... 299346 : + |
| To GenomeBrowser | habu1_scaffold3971:278816..299346 |
| Genes list of scaffold | habu1_scaffold3971 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| exonuclease 3 -5 domain-containing protein 2 | GO:0003676 GO:0008408 GO:0090305 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3971_g13026.t2 | 1 | 1 | DNA_pol_A_exo1 | 94 | 258 | 2.5e-19 | 69.4 | 9.5e-23 | 4.7e-19 | 68.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3971_g13026.t2 | gi|690446692|ref|XP_009323854.1| | PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform X1 [Pygoscelis adeliae] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 7.8 |
| Pit, infrared sensing | 3.3 |
| Nose | 3.3 |
| Brain-1 | 3.3 |
| Eye | 3.0 |
| fetal fibroblast | 2.3 |
| venom gland-2 | 6.8 |
| Brain-2 | 2.5 |
| Spleen | 3.1 |
| Lung | 3.3 |
| Liver | 11.0 |
| Kidney | 7.1 |
| Pancreas | 4.9 |
| Small intestine | 4.3 |
| Large intestine | 3.5 |
| Stomach | 2.5 |
| heart | 4.1 |
| ovary | 3.3 |
| cheek muscle | 6.5 |
Transcript
| Transcript ID | habu1_s3971_g13026.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13026.t1 gctctgaaggggagcccggaagtcttgctgtgccaacgaagaattttttgcctttcgctactaaaacagatcactgcgta ttgccatttttgcaaagatggagtagaaaggaagatgaaaacatgcccagaccaacagcagtcactgttactgtggctac cttgtttggcattgcagcaggaggtctagctatctggaaggtcatccaacgtcgaaaacataacacttgcattacaccta accaaggacaaaatgttaaggaacgagaaaagaaagatatctcagaagacatttttcgttcatctttaccttctcctaca atttgttggctggaggagatccttgaggcaaaagtaataattgtttctgaggcagagaagtggaatgaagtggaacccat aataatgaaagagttggaatgttgtctagtccttggaattgactgtgagtggctgaccagcgggggacaagttcttccaa agactttgcttgaagttctggcagatggcaaaatcctaaaagttggggtaggatgttgggaagatgccagtaagctgtta catgactatagtgtatcagtcaaagggactgtggacctccgctatctggccctaagacatagtaagaccttctccacaaa tgggctcagcctgaagtctcttgctgaaaagcttctccaatattcccttgacaaatctctacacttgtgctgcagcaatt gggaagcggaacagttaactcaagaacagattgattatgctgcccgagatgcccaggtgtcagtggctttgttcctccac ctggtgaacctttcctgccccccttgttcgtcaggtgatggatatgttcttcctgcttggggaaaagtcctgaagaaatg tcagggtttggtggatgtacccttcaggggaaaaaataatagttttggtgatgatgaaaacccaggaaatgtggagcaca gcccacagtatgagaaacttccatctaatgaatcctccccaatcaaccagcaggtgaaggatcctcggaagcacaaacgg aagcctctgggtgtaggatattctgcaaggaaatctcccttgtatgataattgcttcttgcatgctccagatgggcagcc tttatgtacatgtgatcgcaagaaagcccagtggtatcttgacaaaggcattggagaattagtaaatgtggagccgttta ctgtgagattaaagtttgagccttctggacgccctgaatcaactgtggattattacttggcagtcaaagaaaatctgtgt gttgcgtgtggcaaaaaagagtcttatattcgaaagaacattgtacctcacgagtaccggaaacactttcccatccagat gaaagaccacaattctcacgatgtgctccttctctgcactgcgtgtcatgcgctctctaactactatgataatcatctca agcaacaactggcagaagaatttggtgcccctattggttgtgaggagggcgttcgcttgctcgaagatcccacccgcaga ttagtccgttcagcagctagagcacttgtgaatgcagatagcctgcctgctgccaggaaggaagagctgttgcagctgat cagggattactttgcatctgacacagtttccccagagatggtgcaggaagcagctggactggaaaccaggatttttaatg agaactatgtgccacatggcctgaaagtggtccagtcttttgctcaagggggcttatattctctcatggggctggagaaa cgttggcgccagcacttcttggatgttatgcagcccaagcatctcccagcacaatggtctgttgatcacaatcacgacaa gttaatccggaaatatggggagactctccagattgaactttcctgaagatgaaatgatgaaactggaaaatataactgag atttattattttctct |
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| Transcript ID | habu1_s3971_g13026.t2 |
| Definition | - |
>habu1_s3971_g13026.t2 gctctgaaggggagcccggaagtcttgctgtgccaacgaagaattttttgcctttcgctactaaaacagatcactgcgta ttgccatttttgcaaagatggagtagaaaggaagatgaaaacatgcccagaccaacagcagtcactgttactgtggctac cttgtttggcattgcagcaggaggtctagctatctggaaggtcatccaacgtcgaaaacataacacttgcattacaccta accaaggacaaaatgttaaggaacgagaaaagaaagatatctcagaagacatttttcgttcatctttaccttctcctaca atttgttggctggaggagatccttgaggcaaaagtaataattgtttctgaggcagagaagtggaatgaagtggaacccat aataatgaaagagttggaatgttgtctagtccttggaattgactgtgagtgggtctcactgaaaggaaaaaaggccaagc ctgtttctctcttacaattggctacttgtaatggactttgccttcttcttcgtttgccccagctgaccagcgggggacaa gttcttccaaagactttgcttgaagttctggcagatggcaaaatcctaaaagttggggtaggatgttgggaagatgccag taagctgttacatgactatagtgtatcagtcaaagggactgtggacctccgctatctggccctaagacatagtaagacct tctccacaaatgggctcagcctgaagtctcttgctgaaaagcttctccaatattcccttgacaaatctctacacttgtgc tgcagcaattgggaagcggaacagttaactcaagaacagattgattatgctgcccgagatgcccaggtgtcagtggcttt gttcctccacctggtgaacctttcctgccccccttgttcgtcaggtgatggatatgttcttcctgcttggggaaaagtcc tgaagaaatgtcagggtttggtggatgtacccttcaggggaaaaaataatagttttggtgatgatgaaaacccaggaaat gtggagcacagcccacagtatgagaaacttccatctaatgaatcctccccaatcaaccagcaggtgaaggatcctcggaa gcacaaacggaagcctctgggtgtaggatattctgcaaggaaatctcccttgtatgataattgcttcttgcatgctccag atgggcagcctttatgtacatgtgatcgcaagaaagcccagtggtatcttgacaaaggcattggagaattagtaaatgtg gagccgtttactgtgagattaaagtttgagccttctggacgccctgaatcaactgtggattattacttggcagtcaaaga aaatctgtgtgttgcgtgtggcaaaaaagagtcttatattcgaaagaacattgtacctcacgagtaccggaaacactttc ccatccagatgaaagaccacaattctcacgatgtgctccttctctgcactgcgtgtcatgcgctctctaactactatgat aatcatctcaagcaacaactggcagaagaatttggtgcccctattggttgtgaggagggcgttcgcttgctcgaagatcc cacccgcagattagtccgttcagcagctagagcacttgtgaatgcagatagcctgcctgctgccaggaaggaagagctgt tgcagctgatcagggattactttgcatctgacacagtttccccagagatggtgcaggaagcagctggactggaaaccagg atttttaatgagaactatgtgccacatggcctgaaagtggtccagtcttttgctcaagggggcttatattctctcatggg gctggagaaacgttggcgccagcacttcttggatgttatgcagcccaagcatctcccagcacaatggtctgttgatcaca atcacgacaagttaatccggaaatatggggagactctccagattgaactttcctgaagatgaaatgatgaaactggaaaa tataactgagatttattattttctct |
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Protein
| Protein ID | habu1_s3971_g13026.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13026.t1 MPRPTAVTVTVATLFGIAAGGLAIWKVIQRRKHNTCITPNQGQNVKEREKKDISEDIFRSSLPSPTICWLEEILEAKVII VSEAEKWNEVEPIIMKELECCLVLGIDCEWLTSGGQVLPKTLLEVLADGKILKVGVGCWEDASKLLHDYSVSVKGTVDLR YLALRHSKTFSTNGLSLKSLAEKLLQYSLDKSLHLCCSNWEAEQLTQEQIDYAARDAQVSVALFLHLVNLSCPPCSSGDG YVLPAWGKVLKKCQGLVDVPFRGKNNSFGDDENPGNVEHSPQYEKLPSNESSPINQQVKDPRKHKRKPLGVGYSARKSPL YDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGELVNVEPFTVRLKFEPSGRPESTVDYYLAVKENLCVACGKKESYIRKNI VPHEYRKHFPIQMKDHNSHDVLLLCTACHALSNYYDNHLKQQLAEEFGAPIGCEEGVRLLEDPTRRLVRSAARALVNADS LPAARKEELLQLIRDYFASDTVSPEMVQEAAGLETRIFNENYVPHGLKVVQSFAQGGLYSLMGLEKRWRQHFLDVMQPKH LPAQWSVDHNHDKLIRKYGETLQIELS |
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| Protein ID | habu1_s3971_g13026.t2 |
| Definition | - |
>habu1_s3971_g13026.t2 MPRPTAVTVTVATLFGIAAGGLAIWKVIQRRKHNTCITPNQGQNVKEREKKDISEDIFRSSLPSPTICWLEEILEAKVII VSEAEKWNEVEPIIMKELECCLVLGIDCEWVSLKGKKAKPVSLLQLATCNGLCLLLRLPQLTSGGQVLPKTLLEVLADGK ILKVGVGCWEDASKLLHDYSVSVKGTVDLRYLALRHSKTFSTNGLSLKSLAEKLLQYSLDKSLHLCCSNWEAEQLTQEQI DYAARDAQVSVALFLHLVNLSCPPCSSGDGYVLPAWGKVLKKCQGLVDVPFRGKNNSFGDDENPGNVEHSPQYEKLPSNE SSPINQQVKDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGELVNVEPFTVRLKFEPSGR PESTVDYYLAVKENLCVACGKKESYIRKNIVPHEYRKHFPIQMKDHNSHDVLLLCTACHALSNYYDNHLKQQLAEEFGAP IGCEEGVRLLEDPTRRLVRSAARALVNADSLPAARKEELLQLIRDYFASDTVSPEMVQEAAGLETRIFNENYVPHGLKVV QSFAQGGLYSLMGLEKRWRQHFLDVMQPKHLPAQWSVDHNHDKLIRKYGETLQIELS |
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