Gene
| Gene Model ID | habu1_s3971_g13030 |
|---|---|
| Locus | habu1_scaffold3971 : 628001 ... 631850 : - |
| To GenomeBrowser | habu1_scaffold3971:628001..631850 |
| Genes list of scaffold | habu1_scaffold3971 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3971_g13030.t1 | 1 | 1 | DUF4659 | 293 | 667 | 0.0 | 400.9 | 0.0 | 0.0 | 400.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3971_g13030.t1 | gi|602672310|ref|XP_007441661.1| | PREDICTED: coiled-coil domain-containing protein 177 [Python bivittatus] | 0.0 |
| habu1_s3971_g13030.t1 | gi|564254275|ref|XP_006266128.1| | PREDICTED: coiled-coil domain-containing protein 177 [Alligator mississippiensis] | 0.0 |
| habu1_s3971_g13030.t1 | gi|637340312|ref|XP_008116349.1| | PREDICTED: coiled-coil domain-containing protein 177 [Anolis carolinensis] | 0.0 |
| habu1_s3971_g13030.t1 | gi|591358639|ref|XP_007054301.1| | PREDICTED: coiled-coil domain-containing protein 177 [Chelonia mydas] | 0.0 |
| habu1_s3971_g13030.t1 | gi|530638359|ref|XP_005305991.1| | PREDICTED: coiled-coil domain-containing protein 177 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.4 |
| Nose | 0.9 |
| Brain-1 | 6.2 |
| Eye | 5.3 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.2 |
| Brain-2 | 7.9 |
| Spleen | 0.4 |
| Lung | 0.6 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 0.5 |
| Small intestine | 0.1 |
| Large intestine | 0.4 |
| Stomach | 0.4 |
| heart | 0.3 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3971_g13030.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13030.t1 ggttccccccccctccacgccttttctcctcccctggaagaccagccgctcgtcttcacattgtcagcaggaggagctgc gagattctggagggagccagacaatggtggatcccgtagcggatcctggcaaggaagcctgccccgatcctgggagtgcc gcggggggagaagaggctgcggcagccgctacctccgcgacggccgaggctgcagttcagccgcccgcaccccctccggc agcggcgcctcctccagccggagacccggagaaaactcgcgaagagtcgccgatgctgcacctggatctgtacaacttcg actgcccggaagcccaaggcagccgctacgtgctcaccagtccccgctcccttgaagcctgcgctcgatgtgccgtcaag ccggtggagctgctgacccggccgctcaacgagctgatcaaggaggctcccggcaggtctatgcgcgtcgccgccggcct ctatgaggcctacgagatggatcgacagaggaagctgcagcagtgccgggaggaaagggagaggataatccgagaggaga agcggaggcttttcacgcctgtcctgaccggaagcctgccttcctccccggcctccagggcggccttcaaaagcactctg cccgatgggagctgccctccggccggcaagcccaaagcggctggagggcccccacctcctcccctgagtggccccaagac caagaagagccactccctggattccctgcaaaagaggagagagggcttctccaccaagacctcctccgactcaggggcct cttcttcctacagcggagacagtggcagggacaaatgcctgcctaggactaagagcgtggccaccatgacctccctggtg ggtcgcagtttcagcctgagcgacctgagccactccccgcaaaccacccagaaagtggagaggattgtcagggaagtgaa gcagaagaaaggcttcaaggaggtgtctgagagggaccgaaaaattgccgccctgatgatagcgaagcaccaagagcaga gcctgtggaaggagcagcagtacagcgcccacctccagtgggatgtgcagaggagggtggcagagcggaggagggagcag gaggagcgggaaaagcagctggctttgctgcagggccaccggatgtgggaatcccggctggagaagcgacgtggccggct gacccatacttgggaagaggctgtccaggtgaagcaaaggcagaccttgatggaggacgagaagtggcgggaacacgtgg agaagcaggagcgcgtgaggagggagaggctggagaaggctgctctggaggacaagaagaggaaacgccaccaagagcac aacctgaaagctcaggaagaaagcaagaaagaagcccaggtgcgagaggtgcagctgctgcaagaaaagctcaccttggc agcccagaagaagcttatgaaggaacagctgattcagaaggagaagaagctgctcaatcaagctgacaagcagaaacaca aggccattctcaagggactggctaagcaggagacccaagagagggcagtgctgagggccaccatggaagggagcctgagc aaagctcaagagaactatgagcagctcattgagaaaaggaaccaggaactgagagagagagccaaacgggaagacctaca gatccagagggccaagctggcagcagagcgcaaagaccgggaacagaaggagcacgtaagagccttagctcaagcttcgg agaggaagctccaacatgctactcaggtggccgaggaagttgtccagcagaaagctcgaaaggtggtgcagaaccggctg gagaaggagaaggtgcagaaagtaaacaagaggaaagtcgaggagtgtgaagatatccgccggagggagatcctgttgtc tattgagaaaaagctggagcgaagtgaacagatttgtaaggagaaaaaaaatgtcttggaaaatgcaaggtctgtggctc gggcctcattccacgtgagggaaaaagtccgggaagagatgaacatccgtacctttgacaagatggcctttgaggcagaa ctgcaggccagcctcgttaaaaaatgaattgtctttttttatttgggattcagtggggatttctgttttgctgcctattg tcagaattgggagatttttttttaaaaaaaaccaacactttattattttatggagcacaaaaacatgggcatatgcttca taagacctttttcaaatgctcgtgttatacgtattcaaaaaaatgcaactatctatacaaagaaaatatgtattcctctg ttgaataaaatactgtttccgtggaataaaatcaagataggtacattttatataagaactttcccctcctcaagggccat ttcagttccctcaaattctaatgaagtattatcatattgatatatctgagtcttaatttgaatgtcactctgcagtggaa cttttggtctcttatatgtgtccatatttgaaaagagtttatctggtgcactttatttatccttgttgttggaaactctc taggccttgtaactttttaataacaaaactgaaattctgattcacaacatgaaagcatgtggaaaaacttgttccaataa aattgcaaatgtgtagaaagtgt |
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Protein
| Protein ID | habu1_s3971_g13030.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13030.t1 MVDPVADPGKEACPDPGSAAGGEEAAAAATSATAEAAVQPPAPPPAAAPPPAGDPEKTREESPMLHLDLYNFDCPEAQGS RYVLTSPRSLEACARCAVKPVELLTRPLNELIKEAPGRSMRVAAGLYEAYEMDRQRKLQQCREERERIIREEKRRLFTPV LTGSLPSSPASRAAFKSTLPDGSCPPAGKPKAAGGPPPPPLSGPKTKKSHSLDSLQKRREGFSTKTSSDSGASSSYSGDS GRDKCLPRTKSVATMTSLVGRSFSLSDLSHSPQTTQKVERIVREVKQKKGFKEVSERDRKIAALMIAKHQEQSLWKEQQY SAHLQWDVQRRVAERRREQEEREKQLALLQGHRMWESRLEKRRGRLTHTWEEAVQVKQRQTLMEDEKWREHVEKQERVRR ERLEKAALEDKKRKRHQEHNLKAQEESKKEAQVREVQLLQEKLTLAAQKKLMKEQLIQKEKKLLNQADKQKHKAILKGLA KQETQERAVLRATMEGSLSKAQENYEQLIEKRNQELRERAKREDLQIQRAKLAAERKDREQKEHVRALAQASERKLQHAT QVAEEVVQQKARKVVQNRLEKEKVQKVNKRKVEECEDIRRREILLSIEKKLERSEQICKEKKNVLENARSVARASFHVRE KVREEMNIRTFDKMAFEAELQASLVKK |
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