Gene
| Gene Model ID | habu1_s3971_g13034 |
|---|---|
| Locus | habu1_scaffold3971 : 729711 ... 733675 : + |
| To GenomeBrowser | habu1_scaffold3971:729711..733675 |
| Genes list of scaffold | habu1_scaffold3971 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine arginine-rich splicing factor 5 isoform x2 | GO:0005730 GO:0005737 GO:0006369 GO:0006376 GO:0006406 GO:0009611 GO:0016607 GO:0031124 GO:0044822 GO:0050733 GO:0051726 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3971_g13034.t5 | 1 | 1 | RRM_1 | 4 | 57 | 2.8e-08 | 33.2 | 3.5e-11 | 4.3e-08 | 32.6 |
| habu1_s3971_g13034.t5 | 1 | 1 | RRM_6 | 5 | 57 | 2.5e-06 | 27.3 | 3.0e-09 | 3.7e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3971_g13034.t5 | gi|602662290|ref|XP_007436790.1| | PREDICTED: serine/arginine-rich splicing factor 5-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3971_g13034.t5 | gi|694860616|ref|XP_009472126.1| | PREDICTED: serine/arginine-rich splicing factor 5 [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 407.9 |
| Venom grand-1 | 1189.6 |
| Pit, infrared sensing | 514.8 |
| Nose | 418.8 |
| Brain-1 | 333.6 |
| Eye | 573.7 |
| fetal fibroblast | 177.5 |
| venom gland-2 | 974.6 |
| Brain-2 | 353.3 |
| Spleen | 826.8 |
| Lung | 613.1 |
| Liver | 664.9 |
| Kidney | 702.3 |
| Pancreas | 967.5 |
| Small intestine | 860.2 |
| Large intestine | 648.7 |
| Stomach | 594.4 |
| heart | 636.0 |
| ovary | 99.6 |
| cheek muscle | 429.8 |
Transcript
| Transcript ID | habu1_s3971_g13034.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13034.t1 gtggtccgtctttgtccgttgacaccttcatttaaaataataaaaaaaaccgagaacagacgatcctactcaaagcggta ccatgagtggttgtcgtgtattcatcggaaggttgaatccagccgccagagagaaggatgtagagagattctttaaggga tatggacgcatcagagacattgatttgaagagaggttttggatttgtggagtttgaagatcccagagatgctgatgatgc ggtctatgaattggatggaaaagagctctgcagtgaaagagttacaattgaacatgctagagcccgctctagaggtggaa gaggcagagggcgttattctgatcgttttagcagccgccggccacgaaatgacagaagaaatgcaccacctgtaagaaca gaaaatcgtctcattgtagaaaatttgtcttctcgagtcagctggcaggtttgttaaacatgattatcttagacttcgtt taatgggtatgtaatatgtaaatttttttattaagactagtttttatcttaaatttaaaacatttatcaaaattattaat taatgtttaaatgcattgttcaaaagtagtttaatagtattttcaatgtaattttaccttgttttaaaaatccattttaa ccactttaaaaatccattttatttgccagcctatctgtgtcgttggccttatgacgaggagtgcctgtgggttatcctaa tcgttctgtcttggtcactcttggttgggcctggttgacttttccagtcagctcctccagtgtatcagttggccacctct agatctgtgtttgccggtctagacgtaatcgatgcacttccttaaagtgccgggttgcagcgatccccgaaagttaacga gatctgattcctaagttgagaactgtacctcctgtaacgcttcgaaataagagatcgtgatcgagcgagttgaaagatac gcattaggtggtccttggaatcctgatcgcagtaaagtgatccttggtgtaacttcacaagagtagagaatgtctggatc catcagtagtctgctaatagggagggctgtgcgattaaaggcttccatcgactgggtagtt |
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| Transcript ID | habu1_s3971_g13034.t2 |
| Definition | - |
>habu1_s3971_g13034.t2 ggggctttgggacctgcgtgggttctgcctttcctgatgtcagactgcggcagcggagggggcggcggcggaggagctac tcaaagcggtaccatgagtggttgtcgtgtattcatcggaaggttgaatccagccgccagagagaaggatgtagagagat tctttaagggatatggacgcatcagagacattgatttgaagagaggttttggatttgtggagtttgaagatcccagagat gctgatgatgcggtctatgaattggatggaaaagagctctgcagtgaaagagttacaattgaacatgctagagcccgctc tagaggtggaagaggcagagggcgttattctgatcgttttagcagccgccggccacgaaatgacagaagaaatgcaccac ctgtaagaacagaaaatcgtctcattgtagaaaatttgtcttctcgagtcagctggcaggatctcaaagacttcatgaga caagctggggaagtaacatttgcagatgcacacaggcccaaactaaatgaaggggtggttgagtttgcctcttatagtga tctaaagaatgccattgaaaaactttctggcaaggaaattaatggaagaaaaatcaaactaattgagggcagcaaaagac acagtaggtccagaagcaggtctcgctcccgtagcaggagctcttcaagatcccgtagccgctctcggtccagaagccgc aagtcttacaccagatccaggagcaggagccgtagcaaatcacgatcagttagtcgatctcctgccccggaaaaaagtca gaaacgtgcttcttccagtagatcaaagtctcctgcttctgtggatcgccagagatcacgctcaaggtcaagatctgtag atagtggcaactgaattgtgcaggttgccttggaacttttaaatcatacttgctaatcgttgtggtaagtatgtgacttt tgggaaagggactgaaccggggaggagagggttgtaacaactttgtaaatgtggaccatcagaaagttactgaactaatt gtattctctttttgataaatctttttcttgctcacttcattaaatcagaagtgcatagctttatgtatattgctagagtt ctttgaagaaactaatttttttgtatttaaaaaaatctaattctgaacattttctcagtatactctagtaattaaaattt gggatgttaaatgttttaaattggttaattgagttttacaccagctgtaaataaagctttatttcaggttttgggaataa ttcccaagtatttgtttgctgccttggccatatttccaaacatactggtcaaaactcacaataaaactatttaaaaaaaa tgtggtt |
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| Transcript ID | habu1_s3971_g13034.t3 |
| Definition | - |
>habu1_s3971_g13034.t3 ggggctttgggacctgcgtgggttctgcctttcctgatgtcagactgcggcagcggagggggcggcggcggaggagctac tcaaagcggtaccatgagtggttgtcgtgtattcatcggaaggttgaatccagccgccagagagaaggatgtagagagat tctttaagggatatggacgcatcagagacattgatttgaagagaggttttggatttgtggagtttgaagatcccagagat gctgatgatgcggtctatgaattggatggaaaagagctctgcagtgaaagagttacaattgaacatgctagagcccgctc tagaggtggaagaggcagagggcgttattctgatcgttttagcagccgccggccacgaaatgacagaagaaatgcaccac ctgtaagaacagaaaatcgtctcattgtagaaaatttgtcttctcgagtcagctggcagcctatctgtgtcgttggcctt atgacgaggagtgcctgtgggttatcctaatcgttctgtcttggtcactcttggttgggcctggttgacttttccagtca gctcctccagtgtatcagttggccacctctagatctgtgtttgccggtctagacgtaatcgatgcacttccttaaagtgc cgggttgcagcgatccccgaaagttaacgagatctgattcctaagttgagaactgtacctcctgtaacgcttcgaaataa gagatcgtgatcgagcgagttgaaagatacgcattaggtggtccttggaatcctgatcgcagtaaagtgatccttggtgt aacttcacaagagtagagaatgtctggatccatcagtagtctgctaatagggagggctgtgcgattaaaggcttccatcg actgggtagtt |
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| Transcript ID | habu1_s3971_g13034.t4 |
| Definition | - |
>habu1_s3971_g13034.t4 ggggctttgggacctgcgtgggttctgcctttcctgatgtcagactgcggcagcggagggggcggcggcggaggagctac tcaaagcggtaccatgagtggttgtcgtgtattcatcggaaggttgaatccagccgccagagagaaggatgtagagagat tctttaagggatatggacgcatcagagacattgatttgaagagaggttttggatttgtggagtttgaagatcccagagat gctgatgatgcggtctatgaattggatggaaaagagctctgcagtgaaagagttacaattgaacatgctagagcccgctc tagaggtggaagaggcagagggcgttattctgatcgttttagcagccgccggccacgaaatgacagaagaaatgcaccac ctgtaagaacagaaaatcgtctcattgtagaaaatttgtcttctcgagtcagctggcaggtttgttaaacatgattatct tagacttcgtttaatgggtatgtaatatgtaaatttttttattaagactagtttttatcttaaatttaaaacatttatca aaattattaattaatgtttaaatgcattgttcaaaagtagtttaatagtattttcaatgtaattttaccttgttttaaaa atccattttaaccactttaaaaatccattttatttgccagcctatctgtgtcgttggccttatgacgaggagtgcctgtg ggttatcctaatcgttctgtcttggtcactcttggttgggcctggttgacttttccagtcagctcctccagtgtatcagt tggccacctctagatctgtgtttgccggtctagacgtaatcgatgcacttccttaaagtgccgggttgcagcgatccccg aaagttaacgagatctgattcctaagttgagaactgtacctcctgtaacgcttcgaaataagagatcgtgatcgagcgag ttgaaagatacgcattaggtggtccttggaatcctgatcgcagtaaagtgatccttggtgtaacttcacaagagtagaga atgtctggatccatcagtagtctgctaatagggagggctgtgcgattaaaggcttccatcgactgggtagtt |
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| Transcript ID | habu1_s3971_g13034.t5 |
| Definition | - |
>habu1_s3971_g13034.t5 gcttaatgcagtttgctgcttggctagcctagggaaatgttaataaaggatctcaaagacttcatgagacaagctgggga agtaacatttgcagatgcacacaggcccaaactaaatgaaggggtggttgagtttgcctcttatagtgatctaaagaatg ccattgaaaaactttctggcaaggaaattaatggaagaaaaatcaaactaattgagggcagcaaaagacacagtaggtcc agaagcaggtctcgctcccgtagcaggagctcttcaagatcccgtagccgctctcggtccagaagccgcaagtcttacac cagatccaggagcaggagccgtagcaaatcacgatcagttagtcgatctcctgccccggaaaaaagtcagaaacgtgctt cttccagtagatcaaagtctcctgcttctgtggatcgccagagatcacgctcaaggtcaagatctgtagatagtggcaac tgaattgtgcaggttgccttggaacttttaaatcatacttgctaatcgttgtggtaagtatgtgacttttgggaaaggga ctgaaccggggaggagagggttgtaacaactttgtaaatgtggaccatcagaaagttactgaactaattgtattctcttt ttgataaatctttttcttgctcacttcattaaatcagaagtgcatagctttatgtatattgctagagttctttgaagaaa ctaatttttttgtatttaaaaaaatctaattctgaacattttctcagtatactctagtaattaaaatttgggatgttaaa tgttttaaattggttaattgagttttacaccagctgtaaataaagctttatttcaggttttgggaataattcccaagtat ttgtttgctgccttggccatatttccaaacatactggtcaaaactcacaataaaactatttaaaaaaaatgtggtt |
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Protein
| Protein ID | habu1_s3971_g13034.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13034.t1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGR GRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQVC |
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| Protein ID | habu1_s3971_g13034.t2 |
| Definition | - |
>habu1_s3971_g13034.t2 MSDCGSGGGGGGGATQSGTMSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKE LCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR PKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRSRSSSRSRSRSRSRSRKSYTRSRSRSRS KSRSVSRSPAPEKSQKRASSSRSKSPASVDRQRSRSRSRSVDSGN |
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| Protein ID | habu1_s3971_g13034.t3 |
| Definition | - |
>habu1_s3971_g13034.t3 MSDCGSGGGGGGGATQSGTMSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKE LCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQPICVVGLMTRSACGLS |
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| Protein ID | habu1_s3971_g13034.t4 |
| Definition | - |
>habu1_s3971_g13034.t4 MSDCGSGGGGGGGATQSGTMSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKE LCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQVC |
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| Protein ID | habu1_s3971_g13034.t5 |
| Definition | - |
>habu1_s3971_g13034.t5 MLIKDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRSRSSS RSRSRSRSRSRKSYTRSRSRSRSKSRSVSRSPAPEKSQKRASSSRSKSPASVDRQRSRSRSRSVDSGN |
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