Gene
| Gene Model ID | habu1_s3971_g13035 |
|---|---|
| Locus | habu1_scaffold3971 : 735671 ... 821766 : + |
| To GenomeBrowser | habu1_scaffold3971:735671..821766 |
| Genes list of scaffold | habu1_scaffold3971 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sparc-related modular calcium-binding protein 1 isoform x2 | GO:0001654 GO:0005509 GO:0005604 GO:0007165 GO:0010811 GO:0030198 GO:0045667 GO:0050840 GO:0060173 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3971_g13035.t2 | 1 | 1 | Kazal_1 | 54 | 97 | 9.3e-06 | 25.5 | 4.4e-09 | 9.3e-06 | 25.5 |
| habu1_s3971_g13035.t2 | 1 | 1 | Kazal_2 | 57 | 97 | 4.4e-06 | 26.5 | 2.1e-09 | 4.4e-06 | 26.5 |
| habu1_s3971_g13035.t2 | 2 | 1 | Thyroglobulin_1 | 105 | 168 | 2.1e-28 | 97.4 | 6.5e-19 | 1.4e-15 | 56.3 |
| habu1_s3971_g13035.t2 | 2 | 2 | Thyroglobulin_1 | 237 | 302 | 2.1e-28 | 97.4 | 4.6e-17 | 9.8e-14 | 50.4 |
| habu1_s3971_g13035.t2 | 1 | 1 | SPARC_Ca_bdg | 325 | 434 | 5.2e-14 | 52.2 | 5.8e-17 | 1.2e-13 | 51.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.5 |
| Venom grand-1 | 1.4 |
| Pit, infrared sensing | 14.3 |
| Nose | 0.8 |
| Brain-1 | 1.4 |
| Eye | 3.6 |
| fetal fibroblast | 1.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 1.9 |
| Spleen | 3.1 |
| Lung | 4.2 |
| Liver | 49.8 |
| Kidney | 0.7 |
| Pancreas | 9.0 |
| Small intestine | 8.0 |
| Large intestine | 5.8 |
| Stomach | 2.4 |
| heart | 7.4 |
| ovary | 1.5 |
| cheek muscle | 10.6 |
Transcript
| Transcript ID | habu1_s3971_g13035.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13035.t1 taagtcgaggactttccctgcccgggagcgccgcacatgcgtggttccgccccctgcgccggccgaggcgtagctggcaa gcggcagagacggagcaggccaaccaccagctggcccagccaaatggaggtccacctccacagaactacgggcccccggt ttttaataagcgaccacgaccaagatcctcagtgtaaccttcagtgctccagatctgctgtcaagcctctctgcgcttcc gatggcaggacctatgaatcaatgtgtgattatcagagagcaaagtgcaaggattccagtctgaatgtggcacatcgagg caggtgtaaagatgctggtcagagcaaatgcagattagaaagagcccaagcactggatcaagtgaagaagccacaagaag cagtcttcattccagagtgtcatgaggatggatcatttacccaagtccagtgccacacctacactggatattgctggtgt gtcactccagatggcaagcctatcagtggttcttctgtgcagaacaaaactcctgtatgctcaggctcagtaactgaccg gccattaggacagggtaattctggaagaaaagatgatggttcaaaaccaacacccaccatggaaacacaaccagttttgg atggagaagaaattacagcccctacactttggattaaacacttggtcatcaaagattccaaactgaacagctctagtatg aaaaattcagagaaaattaattcatgtgaccaagaaaggcagagtgcacttgaggaagccaagcagaatccgcgtgaagg aattgttatccctgaatgtgcccctggaggactgtacaaaccggtgcagtgtcatcagtccactggctattgctggtgtg ttctcgtagacacaggtcgccccctacctggcacttccacccgatatgagacccctgtatgtgaaagtggtgctcgatcc agaagtccagaaattgacgatcctttcaaagaccgagaacttccaggttgcccagaagggaaaaaagtagaatttattac cagtttactggatgctctcaccacagatatggtacaggctattaactcagcaacacctgccggcggtggaaggttctctg agcctgatcccagccataccctggaagagcgggtggtgcattggtacttcagtcagctggacagcaataacagcagcgac atcaacaaaagggagatgaaacccttcaagcgctacctgaagaagaaagccaagcccaagaaatgttcacgacgcttcac tgactactgtgatctcaacaaagacaagtccatctcgctacaggaattgaaaggctgtttgggggtcaggaaggaagaag gcagcattggcagcttccctcatggaaaaaggcaaggagttaatcctttcggacgccttgtttaagaagatatgccatgg atggatgaatggaaggataggatgcatggccatctgaaaacatgtgagactggcaacacccagtatagcagaagtggcag tcacaacatttgcactttgttaaaaaaaaaaagaagaagaagagaaaaattgtctacatataatacagggttggtggttt tttttttagtaatctgaagaaaagaagaacaaccattgaaatttggaaagaaaactgaacatctacttgtgatttaaatc ttgaggattgcttggacttgaaaaaatgtttaatatactgtatataaaatgtaaattac |
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| Transcript ID | habu1_s3971_g13035.t2 |
| Definition | - |
>habu1_s3971_g13035.t2 taagtcgaggactttccctgcccgggagcgccgcacatgcgtggttccgccccctgcgccggccgaggcgtagctggcaa gcggcagagacggagcaggccaaccaccagctggcccagccaaatggaggtccacctccacagaactacgggcccccggt ttttaataagcgaccacgaccaagatcctcagtgtaaccttcagtgctccagatctgctgtcaagcctctctgcgcttcc gatggcaggacctatgaatcaatgtgtgattatcagagagcaaagtgcaaggattccagtctgaatgtggcacatcgagg caggtgtaaagatgctggtcagagcaaatgcagattagaaagagcccaagcactggatcaagtgaagaagccacaagaag cagtcttcattccagagtgtcatgaggatggatcatttacccaagtccagtgccacacctacactggatattgctggtgt gtcactccagatggcaagcctatcagtggttcttctgtgcagaacaaaactcctgtatgctcaggctcagtaactgaccg gccattaggacagggtaattctggaagaaaagatgatggttcaaaaccaacacccaccatggaaacacaaccagttttgg atggagaagaaattacagcccctacactttggattaaacacttggtcatcaaagattccaaactgaacagctctagtatg aaaaattcagagaaaattaattcatgtgaccaagaaaggcagagtgcacttgaggaagccaagcagaatccgcgtgaagg aattgttatccctgaatgtgcccctggaggactgtacaaaccggtgcagtgtcatcagtccactggctattgctggtgtg ttctcgtagacacaggtcgccccctacctggcacttccacccgatatgagacccctgtatgtgaaagtggtgctcgatcc agaagtccagaaattgacgatcctttcaaagaccgagaacttccaggttgcccagaagggaaaaaagtagaatttattac cagtttactggatgctctcaccacagatatggtacaggctattaactcagcaacacctgccggcggtggaaggttctctg agcctgatcccagccataccctggaagagcgggtggtgcattggtacttcagtcagctggacagcaataacagcagcgac atcaacaaaagggagatgaaacccttcaagcgctacctgaagaagaaagccaagcccaagaaatgttcacgacgcttcac tgactactgtgatctcaacaaagacaagtccatctcgctacaggaattgaaaggctgtttgggggtcaggaaggaagaag gcagcattggcagcttccctcatggaaaaaggcaaggagttaatcctttcgtaggacgccttgtttaagaagatatgcca tggatggatgaatggaaggataggatgcatggccatctgaaaacatgtgagactggcaacacccagtatagcagaagtgg cagtcacaacatttgcactttgttaaaaaaaaaaagaagaagaagagaaaaattgtctacatataatacagggttggtgg ttttttttttagtaatctgaagaaaagaagaacaaccattgaaatttggaaagaaaactgaacatctacttgtgatttaa atcttgaggattgcttggacttgaaaaaatgtttaatatactgtatataaaatgtaaattac |
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Protein
| Protein ID | habu1_s3971_g13035.t1 |
|---|---|
| Definition | - |
>habu1_s3971_g13035.t1 MRGSAPCAGRGVAGKRQRRSRPTTSWPSQMEVHLHRTTGPRFLISDHDQDPQCNLQCSRSAVKPLCASDGRTYESMCDYQ RAKCKDSSLNVAHRGRCKDAGQSKCRLERAQALDQVKKPQEAVFIPECHEDGSFTQVQCHTYTGYCWCVTPDGKPISGSS VQNKTPVCSGSVTDRPLGQGNSGRKDDGSKPTPTMETQPVLDGEEITAPTLWIKHLVIKDSKLNSSSMKNSEKINSCDQE RQSALEEAKQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESGARSRSPEIDDPFKDR ELPGCPEGKKVEFITSLLDALTTDMVQAINSATPAGGGRFSEPDPSHTLEERVVHWYFSQLDSNNSSDINKREMKPFKRY LKKKAKPKKCSRRFTDYCDLNKDKSISLQELKGCLGVRKEEGSIGSFPHGKRQGVNPFGRLV |
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| Protein ID | habu1_s3971_g13035.t2 |
| Definition | - |
>habu1_s3971_g13035.t2 MRGSAPCAGRGVAGKRQRRSRPTTSWPSQMEVHLHRTTGPRFLISDHDQDPQCNLQCSRSAVKPLCASDGRTYESMCDYQ RAKCKDSSLNVAHRGRCKDAGQSKCRLERAQALDQVKKPQEAVFIPECHEDGSFTQVQCHTYTGYCWCVTPDGKPISGSS VQNKTPVCSGSVTDRPLGQGNSGRKDDGSKPTPTMETQPVLDGEEITAPTLWIKHLVIKDSKLNSSSMKNSEKINSCDQE RQSALEEAKQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESGARSRSPEIDDPFKDR ELPGCPEGKKVEFITSLLDALTTDMVQAINSATPAGGGRFSEPDPSHTLEERVVHWYFSQLDSNNSSDINKREMKPFKRY LKKKAKPKKCSRRFTDYCDLNKDKSISLQELKGCLGVRKEEGSIGSFPHGKRQGVNPFVGRLV |
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