Gene
| Gene Model ID | habu1_s399842_g24542 |
|---|---|
| Locus | habu1_scaffold399842 : 71716 ... 87525 : - |
| To GenomeBrowser | habu1_scaffold399842:71716..87525 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium calmodulin-dependent protein kinase kinase 2 isoform x2 | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24542.t1 | 1 | 1 | Pkinase | 142 | 423 | 0.0 | 226.6 | 0.0 | 0.0 | 225.8 |
| habu1_s399842_g24542.t1 | 1 | 1 | Pkinase_Tyr | 208 | 417 | 2.2e-35 | 121.9 | 8.2e-37 | 2.4e-33 | 115.2 |
| habu1_s399842_g24542.t1 | 1 | 1 | Kinase-like | 264 | 411 | 3.7e-09 | 35.9 | 1.9e-12 | 5.7e-09 | 35.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24542.t1 | gi|602655117|ref|XP_007433328.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s399842_g24542.t1 | gi|602655115|ref|XP_007433327.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s399842_g24542.t1 | gi|602655119|ref|XP_007433329.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s399842_g24542.t1 | gi|686610979|ref|XP_009282175.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 isoform X2 [Aptenodytes forsteri] | 0.0 |
| habu1_s399842_g24542.t1 | gi|564268207|ref|XP_006272900.1| | PREDICTED: calcium/calmodulin-dependent protein kinase kinase 2 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.2 |
| Venom grand-1 | 4.6 |
| Pit, infrared sensing | 5.0 |
| Nose | 6.4 |
| Brain-1 | 10.6 |
| Eye | 5.5 |
| fetal fibroblast | 6.3 |
| venom gland-2 | 21.0 |
| Brain-2 | 9.2 |
| Spleen | 9.8 |
| Lung | 5.8 |
| Liver | 2.9 |
| Kidney | 2.2 |
| Pancreas | 18.3 |
| Small intestine | 3.1 |
| Large intestine | 5.9 |
| Stomach | 6.8 |
| heart | 14.6 |
| ovary | 3.7 |
| cheek muscle | 1.2 |
Transcript
| Transcript ID | habu1_s399842_g24542.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24542.t1 atggagaccttcctagacaggctgcgggaagcgctgggtctgtagctgcctggatcccccccaccggttggagccacagg cagcatccaggagagcggctgccgcagcatgggcattcagctggtcagcacataatgctcccatgcgcctccatcggccc tgtccccgtgaagctccttctttgccgtgacttccttggccaggtgcaagagaagccttcctgcttgacagaactaaaat gtgacctcctggagcaccatggagtccttcgtggtggtagcggagtacgactctccccccagttccacagcaggccagcc ggaggggctggcggatgaggagcccatggagccatgcgaggagcagccccttctgggcccggttcctggaggtcgcgaag aaccaggcccggccaaccctccaagggcttcctccagagagatcagggaaccttggatcaaagtcaacctttcaagtcgc aagctgtctctgcaagagaggtctccctccgtccagtcccccagcgggaacatgggggtcaacgggcgctacatttaccc ttccctcccttactcccccgtcacctccccacactcttccccacgtctgccccgcaggcccaccatcgaatcccaccgag tttccatcaccggattgcaggattgtgtgcagctcaatcaatacactctgaaggatgaaattggaaagggctcctatggt gttgtgaagctggcatacaatgaagatgacaacacttactatgcaatgaaagtgctttccaagaagaagctgatgagact agcgggtttcccacgccgccctcctcctcggggtgccaaactgcccttggaaggcttctgccaacccagaggacccattg agcaggtctaccaagagatcgccatcttgaagaagctggaccacccaaacatcgtcaagctggtggaggtattggatgac cccacggaagatcatttatacatggtgtttgaacttgtgaaaaaggggccagtgatggaagttcccaatctgaagcctct tactgaagaccaggcacgattttatttccaagacctgatcaaaggcattgaatacttacactaccaaaaaattatccacc gggacattaaaccttccaaccttttggtgggcgaagacggtcacatcaaaattgccgattttggcgtgagtaatgaattc aaaggatcggatgccctgttgaccaacacggtgggcacgccagcattcatggccccagagacgctctccgaaaccaggaa aatattttcaggaaaggctttagatgtctgggcaatgggaatcacgctgtactgttttgtcttcggacagtgtcctttta tggatgagcggatccttagtctgcacagcaaaatcaagagccagatgctggaatttccggaccaaccagacatttctgac gaactgaaggatctaataacccagatgctggacaaaaaacccgaatccaggatcaccatcccagaaattaagctgcatcc gtgggtcaccaagaacggcaccgagccgctgccgaccgaggatgaaaattgcacgctgatcgaggtcaccgaagaagagg tggagaactcagtcaagcacattcccagcttagccaccgtgatcctggtaaagtccatgatcaggaaaagatcctttggg aatccgtttgaggggagtagaagagaagaaagatttctttctgcaccagaccggcagacgtacttgataaaacagagcag cgaagaggctttccacaccatgaacgatctgccaaacgtgagcgaagacgaactgctttcttgaaaaaaggaaaaaccct ggcccttcctgtaagagagatcctgcttagctcaccgtgcctggtgtgcgaaaagaaggcgttctgcagacggttgagcc ggcttgccttgcaggacgtcggttcattgtttaaataccaaatgtaaagattttcatgacagcatgctgtacagatcaga atccattctataaccatccaaaaagatctctgctgattaaagacagggtgtggaaccctgaaggatgatcttcaggctcg ctggtggtcctcctccagcagtgaagcatcgtgctgactttccggaaaaagcaaaaaaaaagaagcaaagaactcaccaa aaatgaaaccaagtttgggaagaaacctacatctgctcaggccaaatcctttgcaaaaaaacaacaacaacaatccaatt tttttatcagtggatggctaaaccatggtgcttcttgccaaatgaggatcgagaaaacgcttgcttttggtggttttttt tgttgttgttaataattattgttatccctttttactgcatggaaaccaaaccgatttcacactgaggaagtatttgcaga acgcttagctttttgtgagcaggcgatttgagttttaagagcgggctttttgaaaactcttttgagtttttcctaagtcc gaagggaaaggcggaagggacgcacaccggcaaagggcaagaacggtgcatttgaagatgggttgtgcggttgcgttcaa gcacaaattgccaacatgcatttgttttggtgcagcagtgtgcttggctggcaaagcacaggctcgtattttactgatca taattctactttatatctgtgttattgtatggctatgtacacaaaattcagggttttataaatagtagccatccggtgct tgctggcatgtttcaaataagtcaaataactttcaagaatgggcgtagagattccgctgtttttcaagactctccaagga tttaaaccaaaaccagatttttgagcacttttccaacttgcttattaagttcctccagacttctggatagaaagcagtca gcatcgtgtgttccagtagagtcgcagctcctaaaagagggaactgttgtggcaagcctaggggatcctgacgtattctg aacctcacctgtaatccttttcacagattaaccttgctcggaagtaatacggctcattaaactctttgcatctgcttttt ttt |
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Protein
| Protein ID | habu1_s399842_g24542.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24542.t1 MESFVVVAEYDSPPSSTAGQPEGLADEEPMEPCEEQPLLGPVPGGREEPGPANPPRASSREIREPWIKVNLSSRKLSLQE RSPSVQSPSGNMGVNGRYIYPSLPYSPVTSPHSSPRLPRRPTIESHRVSITGLQDCVQLNQYTLKDEIGKGSYGVVKLAY NEDDNTYYAMKVLSKKKLMRLAGFPRRPPPRGAKLPLEGFCQPRGPIEQVYQEIAILKKLDHPNIVKLVEVLDDPTEDHL YMVFELVKKGPVMEVPNLKPLTEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL LTNTVGTPAFMAPETLSETRKIFSGKALDVWAMGITLYCFVFGQCPFMDERILSLHSKIKSQMLEFPDQPDISDELKDLI TQMLDKKPESRITIPEIKLHPWVTKNGTEPLPTEDENCTLIEVTEEEVENSVKHIPSLATVILVKSMIRKRSFGNPFEGS RREERFLSAPDRQTYLIKQSSEEAFHTMNDLPNVSEDELLS |
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