Gene
| Gene Model ID | habu1_s399842_g24543 |
|---|---|
| Locus | habu1_scaffold399842 : 89449 ... 98975 : - |
| To GenomeBrowser | habu1_scaffold399842:89449..98975 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24543.t1 | 1 | 1 | Apc5 | 254 | 353 | 3.4e-30 | 103.7 | 2.1e-33 | 3.4e-30 | 103.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24543.t1 | gi|602655111|ref|XP_007433325.1| | PREDICTED: anaphase-promoting complex subunit 5 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s399842_g24543.t1 | gi|602655109|ref|XP_007433324.1| | PREDICTED: anaphase-promoting complex subunit 5 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s399842_g24543.t1 | gi|694832657|ref|XP_009471053.1| | PREDICTED: anaphase-promoting complex subunit 5 [Nipponia nippon] | 0.0 |
| habu1_s399842_g24543.t1 | gi|602655113|ref|XP_007433326.1| | PREDICTED: anaphase-promoting complex subunit 5 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s399842_g24543.t1 | gi|530617968|ref|XP_005298709.1| | PREDICTED: anaphase-promoting complex subunit 5 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.7 |
| Venom grand-1 | 3.6 |
| Pit, infrared sensing | 3.5 |
| Nose | 4.3 |
| Brain-1 | 3.7 |
| Eye | 3.8 |
| fetal fibroblast | 9.7 |
| venom gland-2 | 3.1 |
| Brain-2 | 4.7 |
| Spleen | 2.1 |
| Lung | 2.3 |
| Liver | 3.1 |
| Kidney | 4.5 |
| Pancreas | 2.5 |
| Small intestine | 2.6 |
| Large intestine | 2.1 |
| Stomach | 3.1 |
| heart | 3.0 |
| ovary | 76.2 |
| cheek muscle | 4.1 |
Transcript
| Transcript ID | habu1_s399842_g24543.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24543.t1 cggtcccccgtcgcgccgcgaaggagccatggccagcgtccacgagagcctctacttcaaccccatgatgaccaacggcg tggtccacgccaacgtcttcggcatcaaggactgggtcaccccctacaagatggcgctgctggtgctgatccgggagctg ggccggactgggccgcaactcagcctgctcgaaaagcggcggctcaaccggctactgctgcccctcttgcagggccctga tatgacactgtctcgtttgattcaaagtatttgtgaatgctgctctgaaatagcaaattctgttcaagcaagaatcaagc tgatggcagaaagggaattgaaagatatggagcaattctttgataatctttcagactcattcagtggaacagaaccagaa gttcacaaaacaagtgttgtaggcttgtttctgcgccacatgatcctggcctataataagctttcattcagccaagtcta caagctttacacagctctccagcagtacttccaagctgatgcgaagaaagggaggggggatgagagtgaaatggagctga cacgttgcggagaagcggatgaggaaatggagaaagaagaacttgacggaccattcagggaggaagagatatcctgcaat ggcccactatcacagaagcaagcggaatacttcctctcacaacaggcatctttgttgaaaaatgatgagaccaaagcact ttctccagcatcgttgcaaaaggagctgaacaacttgttaaaatttaacccggattttgctgaagcgcattatctgagct acttaaacagccttcgagtccaagacgtcttcagctcaacgcacagtctccttcattacttcgaccgcttgattctcacc ggggcagaaagcaaaagtaacggggatgaaggttatgggcgaagcctcagatacgctgcccttaatttggctgcactgca ctgccggttcggtcactaccaccaggctgagctggccttgcaggaagccatccggattgcccaggaatcgaacgatcacg tctgcttacagcactgcttgagctggctgcacatcctggaacagaaaagatcggatagctgcatacttctagagcattcc gtgaagaaagctgtatattttggattgccatatttagcctctctggggatccagtctttggtccagcaaagagctttggc aggaaagacggccaacaagctaatggatgctttgaaagactccgacctcttgcactggaaacacagcttgtccgaactga ttgatattagcatcgctcagaagacggccatttggaggctgtatgggcgcagcacaatggcgctccagcaggcccagatg ctcttgagcatgaacagcctggaggccgtgaacgtgggcgttcagcaaaacaacaccgagtcttttgccgtggtgctgtg ccacttggcggagctgcatgcagagcagggttatttcacggcggcctctgagattctgaagcatctcaaagagagatttc ccaccaatagtcagcacgcccagctgtggatgctgtttgatcagaaaatccagtttgaccgagccatgaacgatggccga taccatgtcgccgactcgctggtggccgggatcactgctctgaatagctgcgaaggcgtttacaggaaggcggctttgct caaagcccagaatcagatgtccaaggcacacaaactccttgagaagctcttgatccactgccataaagtcaaaaataccg agatggtcatcagcgtcctgctctccgttgccgagctgtattggcagtctctgtgccacacgatcgctttgcccgtcctg ctgcaggccctggccctggccagagaataccgcctgcagtacttggcttcggagaccatcctcaatttggcttttgccca gctgatcctggggattcccgagcaagccctcagcatcctgcatatggccatcgagcccatcctggcccacggggccgtgc tggacaaaggagctgcaatgtttttggtggccaagtgccaggtggcttctgcagcctcttacgagccggcaaagaaggca gaagctctggaagcagctatcctgaacttgaatgaagccaaaacctattttgcaaaagtggactgtaaagaacagctgcg ggacatcctctatctgcaagccaggctcttccacagcctgggtaagacccaggagaggaaccagtgcgccatgctcttcc ggcagcttcacctggaattccccgcccggggcgtccccctgatcagcactttcaaatgaggcctctgagcaaaggaatcc agtctttggggaaggccagtggagcccctcaagtggaacgagatctgtagatccttcctccgcagttctcccccccactc ctgtctgtgtgtctctcaccctgcgccctgttcggtctctgcaaatgccaataaattgctctctgggtgcccagatg |
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Protein
| Protein ID | habu1_s399842_g24543.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24543.t1 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKMALLVLIRELGRTGPQLSLLEKRRLNRLLLPLLQGPDMTLSRLIQS ICECCSEIANSVQARIKLMAERELKDMEQFFDNLSDSFSGTEPEVHKTSVVGLFLRHMILAYNKLSFSQVYKLYTALQQY FQADAKKGRGDESEMELTRCGEADEEMEKEELDGPFREEEISCNGPLSQKQAEYFLSQQASLLKNDETKALSPASLQKEL NNLLKFNPDFAEAHYLSYLNSLRVQDVFSSTHSLLHYFDRLILTGAESKSNGDEGYGRSLRYAALNLAALHCRFGHYHQA ELALQEAIRIAQESNDHVCLQHCLSWLHILEQKRSDSCILLEHSVKKAVYFGLPYLASLGIQSLVQQRALAGKTANKLMD ALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNVGVQQNNTESFAVVLCHLAELHAEQ GYFTAASEILKHLKERFPTNSQHAQLWMLFDQKIQFDRAMNDGRYHVADSLVAGITALNSCEGVYRKAALLKAQNQMSKA HKLLEKLLIHCHKVKNTEMVISVLLSVAELYWQSLCHTIALPVLLQALALAREYRLQYLASETILNLAFAQLILGIPEQA LSILHMAIEPILAHGAVLDKGAAMFLVAKCQVASAASYEPAKKAEALEAAILNLNEAKTYFAKVDCKEQLRDILYLQARL FHSLGKTQERNQCAMLFRQLHLEFPARGVPLISTFK |
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