Gene
| Gene Model ID | habu1_s399842_g24544 |
|---|---|
| Locus | habu1_scaffold399842 : 100596 ... 107228 : + |
| To GenomeBrowser | habu1_scaffold399842:100596..107228 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24544.t2 | 1 | 1 | zf-C3HC4_3 | 323 | 364 | 8.5e-12 | 44.5 | 3.4e-15 | 8.5e-12 | 44.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.7 |
| Venom grand-1 | 3.6 |
| Pit, infrared sensing | 4.9 |
| Nose | 7.2 |
| Brain-1 | 3.7 |
| Eye | 17.1 |
| fetal fibroblast | 5.0 |
| venom gland-2 | 4.6 |
| Brain-2 | 4.1 |
| Spleen | 3.0 |
| Lung | 4.9 |
| Liver | 2.5 |
| Kidney | 3.8 |
| Pancreas | 2.1 |
| Small intestine | 2.8 |
| Large intestine | 3.9 |
| Stomach | 7.7 |
| heart | 2.9 |
| ovary | 68.4 |
| cheek muscle | 3.6 |
Transcript
| Transcript ID | habu1_s399842_g24544.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24544.t1 acgcgcgggccgggggcgcgagcgggagacggttgagccgttggagccccttccccccacttccggtcctatcccggtcg agacgaagacaggaggaagcttcggagcggccatgaaggcaggggcgacctccatgtgggcttcctgctgcgggttgctg aatgaggtcatggggacaggagcggttcgtggccagcagcccggattcggaagtggagcgaacccctttcggtttgcgcc aaacacggacttcaccgtctactcctcggcggcagccacgggagcgaaccccgcggtctgcaagtcttgtggcctttcct tctccgtattcaggaaaaagcacgtgtgctgtgagtgcaagaaggacttctgctccgtctgctccgtcttgcaagacagc ctccgccggtgctgcacctgccagttgctgcaggagacggccttccagcggccgcagctaatccgcttgaaagtcaagga tctgcgccagtacctgctccttaggaacatccccacggacacctgccgcgaaaaggaagacttggtcgacctcatcctgt gccatcacggattggcctccgaggaggagacggacactagcagcttgtactcgacgcagtcgcaggcttccagtttttcc acccagcgcatttctctgtctggattggtgtctacctctcagggagaccttgccagccggcaggagaatatgggcagtga aatacagttactggggcccagcgagagactctcggcggatctgggggcagaggaagaccaggcagcacaagaaactccag gccagtccaggaagcgtgccagggcctcgctgtccgatatttccagcctggatgacgtggaagggctgaccgtccggcag ctgaaagaaatcctggcttgtaactttgtcaattattcgggatgttgtgaaaaatgggaactggtagaaaaagtcagccg gctctacagggagaaccaaacgaatcaccggctgcaaggggagaaacctccgctggctgacgaggacgacaacctttgcc ggatctgcatggacgcggtgatcgattgcgtgctgctcgaatgcggccacatggtcgcctgcaccaaatgcgggaagcgc atgagcgagtgtccgatctgccgccagttcgtggtccgggccgtgcacgtgttcaagtcctgagcgcctgggcccagcac cggaagcttcctgctgcacacatttcctcccgagacggtcacgtgtggaggctctggaaagcctcggttccagttaattc atagcatcctgaccaggagcttaggagctttgaccgattgtatttctgctttgcaagt |
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| Transcript ID | habu1_s399842_g24544.t2 |
| Definition | - |
>habu1_s399842_g24544.t2 acgcgcgggccgggggcgcgagcgggagacggttgagccgttggagccccttccccccacttccggtcctatcccggtcg agacgaagacaggaggaagcttcggagcggccatgaaggcaggggcgacctccatgtgggcttcctgctgcgggttgctg aatgaggtcatggggacaggagcggttcgtggccagcagcccggattcggaagtggagcgaacccctttcggtttgcgcc aaacacggacttcaccgtctactcctcggcggcagccacgggagcgaaccccgcggtctgcaagtcttgtggcctttcct tctccgtattcaggaaaaaggaagacaacaaaatggagattgggacattcggaagccctcgtagctgggagcacgtgtgc tgtgagtgcaagaaggacttctgctccgtctgctccgtcttgcaagacagcctccgccggtgctgcacctgccagttgct gcaggagacggccttccagcggccgcagctaatccgcttgaaagtcaaggatctgcgccagtacctgctccttaggaaca tccccacggacacctgccgcgaaaaggaagacttggtcgacctcatcctgtgccatcacggattggcctccgaggaggag acggacactagcagcttgtactcgacgcagtcgcaggcttccagtttttccacccagcgcatttctctgtctggattggt gtctacctctcagggagaccttgccagccggcaggagaatatgggcagtgaaatacagttactggggcccagcgagagac tctcggcggatctgggggcagaggaagaccaggcagcacaagaaactccaggccagtccaggaagcgtgccagggcctcg ctgtccgatatttccagcctggatgacgtggaagggctgaccgtccggcagctgaaagaaatcctggcttgtaactttgt caattattcgggatgttgtgaaaaatgggaactggtagaaaaagtcagccggctctacagggagaaccaaacgaatcacc ggctgcaaggggagaaacctccgctggctgacgaggacgacaacctttgccggatctgcatggacgcggtgatcgattgc gtgctgctcgaatgcggccacatggtcgcctgcaccaaatgcgggaagcgcatgagcgagtgtccgatctgccgccagtt cgtggtccgggccgtgcacgtgttcaagtcctgagcgcctgggcccagcaccggaagcttcctgctgcacacatttcctc ccgagacggtcacgtgtggaggctctggaaagcctcggttccagttaattcatagcatcctgaccaggagcttaggagct ttgaccgattgtatttctgctttgcaagt |
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Protein
| Protein ID | habu1_s399842_g24544.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24544.t1 MKAGATSMWASCCGLLNEVMGTGAVRGQQPGFGSGANPFRFAPNTDFTVYSSAAATGANPAVCKSCGLSFSVFRKKHVCC ECKKDFCSVCSVLQDSLRRCCTCQLLQETAFQRPQLIRLKVKDLRQYLLLRNIPTDTCREKEDLVDLILCHHGLASEEET DTSSLYSTQSQASSFSTQRISLSGLVSTSQGDLASRQENMGSEIQLLGPSERLSADLGAEEDQAAQETPGQSRKRARASL SDISSLDDVEGLTVRQLKEILACNFVNYSGCCEKWELVEKVSRLYRENQTNHRLQGEKPPLADEDDNLCRICMDAVIDCV LLECGHMVACTKCGKRMSECPICRQFVVRAVHVFKS |
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| Protein ID | habu1_s399842_g24544.t2 |
| Definition | - |
>habu1_s399842_g24544.t2 MKAGATSMWASCCGLLNEVMGTGAVRGQQPGFGSGANPFRFAPNTDFTVYSSAAATGANPAVCKSCGLSFSVFRKKEDNK MEIGTFGSPRSWEHVCCECKKDFCSVCSVLQDSLRRCCTCQLLQETAFQRPQLIRLKVKDLRQYLLLRNIPTDTCREKED LVDLILCHHGLASEEETDTSSLYSTQSQASSFSTQRISLSGLVSTSQGDLASRQENMGSEIQLLGPSERLSADLGAEEDQ AAQETPGQSRKRARASLSDISSLDDVEGLTVRQLKEILACNFVNYSGCCEKWELVEKVSRLYRENQTNHRLQGEKPPLAD EDDNLCRICMDAVIDCVLLECGHMVACTKCGKRMSECPICRQFVVRAVHVFKS |
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