Gene
| Gene Model ID | habu1_s399842_g24548 |
|---|---|
| Locus | habu1_scaffold399842 : 156086 ... 163220 : + |
| To GenomeBrowser | habu1_scaffold399842:156086..163220 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 120b | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24548.t1 | 1 | 1 | TMPIT | 27 | 336 | 0.0 | 506.5 | 0.0 | 0.0 | 506.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24548.t1 | gi|602631838|ref|XP_007422816.1| | PREDICTED: transmembrane protein 120B [Python bivittatus] | 0.0 |
| habu1_s399842_g24548.t1 | gi|585691284|ref|XP_006894711.1| | PREDICTED: transmembrane protein 120B [Elephantulus edwardii] | 0.0 |
| habu1_s399842_g24548.t1 | gi|670992442|ref|XP_008687203.1| | PREDICTED: transmembrane protein 120B [Ursus maritimus] | 0.0 |
| habu1_s399842_g24548.t1 | gi|637357598|ref|XP_008119550.1| | PREDICTED: transmembrane protein 120B [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24548.t1 | gi|532087874|ref|XP_005329646.1| | PREDICTED: transmembrane protein 120B isoform X1 [Ictidomys tridecemlineatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 4.2 |
| Nose | 10.5 |
| Brain-1 | 13.0 |
| Eye | 10.8 |
| fetal fibroblast | 9.7 |
| venom gland-2 | 4.5 |
| Brain-2 | 13.1 |
| Spleen | 1.4 |
| Lung | 0.8 |
| Liver | 0.4 |
| Kidney | 26.3 |
| Pancreas | 0.4 |
| Small intestine | 0.2 |
| Large intestine | 1.0 |
| Stomach | 0.8 |
| heart | 3.7 |
| ovary | 48.7 |
| cheek muscle | 6.5 |
Transcript
| Transcript ID | habu1_s399842_g24548.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24548.t1 atgtgacccagttgccaagcatctaaattttgatcacgtgaccacggggatgctgcgacggtcgtaagggtgaaaaacgg tcatgagtcccttttttttccaatactggactagctgtatttgcagtgggcagcactgaactctctgcaactcattcttt ctttatccgttcctggaggaacttttttagaaatgattaaccttcaacctcgggcacctgtgccaagattggtctgcagc caaacggagtttgtgaggttcctggaatgggaaacccacaaaatttacaagcagaaattggaggaactcacaagcttgca ggtggcttgcagcagttctgtaaagaagcaaaaacagaggctgaaggagttgcaggataactttaaaaggtgcgacggcc aggacagctcagaaacggagctcatcctgcagatcaacaaccagatccgtgaccgccagaatgttttcttcgacatggag gcctatttgccgaagaggaacagtctgtacttaaatctggtgttggggaacgttaatgttactctgctaagcgatcaggc caagtttgcctacaaagacgaatatgaaaaattcaaactctacttaaccatcatcctgttgctcggagcggttgcctgcc ggtttgttctccattatcgggtcactgatgaagtgttcaatttcctcttggtttggtattactgcacgctgacgataaga gaaagcatcctcatcagcaatggatcgaggattaaaggctggtgggtgtctcatcattacatttctacgttcttatctgg ggtgatgctaacttggccagagggtctcatgtaccaaatgttccggaaccagtttttatctttctccatttttcagagct gtgtccagttccttcaatattattatcagagtgggtgcctttatcgactccgtgctctggggaaaagaaaccacttggat ctcacagtggaggggtttcagtcctggatgtggcgaggtctgacgtttctcctcccttttttgttctttgggcagttttg gcaactctacaacgcgatcaccctttttgaactgtccaggcacaagaagtgtaaagaatggcaagtttcagttctggctc tgacatttctgattctcttcctcggaaacttcctcaccacgctgaaagtggtccatacaaaattccagaagaacaaaacc aagaagttgtgaaagaggaggactgaactggcaggcaggacaagtcaacgtgggatggagttgtggttcatggtggcctt ctctgcatgtgttccaactagttctccagcttcctgactggcctgccgctaagcaaagccctggaggaaatgccactcaa cgtcccgttgtctcctccaaaactgactgattggtcaatgctgctgtcttcccaccaatgagtgacctgtttatatattt atactgaatgcaagagcccaaattttggggagacataatgttggtcctctctgggagggacacggagatagaattattat ggaataaagcgagctttaattacactgctc |
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Protein
| Protein ID | habu1_s399842_g24548.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24548.t1 MINLQPRAPVPRLVCSQTEFVRFLEWETHKIYKQKLEELTSLQVACSSSVKKQKQRLKELQDNFKRCDGQDSSETELILQ INNQIRDRQNVFFDMEAYLPKRNSLYLNLVLGNVNVTLLSDQAKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTDE VFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYISTFLSGVMLTWPEGLMYQMFRNQFLSFSIFQSCVQFLQYYYQS GCLYRLRALGKRNHLDLTVEGFQSWMWRGLTFLLPFLFFGQFWQLYNAITLFELSRHKKCKEWQVSVLALTFLILFLGNF LTTLKVVHTKFQKNKTKKL |
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