Gene
| Gene Model ID | habu1_s399842_g24549 |
|---|---|
| Locus | habu1_scaffold399842 : 163754 ... 168535 : - |
| To GenomeBrowser | habu1_scaffold399842:163754..168535 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho-related gtp-binding protein partial | GO:0003924 GO:0005525 GO:0005829 GO:0005856 GO:0005886 GO:0007015 GO:0008152 GO:0051056 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24549.t2 | 1 | 1 | Ras | 26 | 195 | 0.0 | 165.3 | 0.0 | 0.0 | 165.0 |
| habu1_s399842_g24549.t2 | 1 | 1 | Miro | 26 | 139 | 2.3e-17 | 63.5 | 1.0e-20 | 3.7e-17 | 62.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.1 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 5.2 |
| Nose | 4.6 |
| Brain-1 | 2.0 |
| Eye | 4.2 |
| fetal fibroblast | 4.8 |
| venom gland-2 | 3.4 |
| Brain-2 | 2.2 |
| Spleen | 21.0 |
| Lung | 7.1 |
| Liver | 11.2 |
| Kidney | 7.7 |
| Pancreas | 4.2 |
| Small intestine | 7.1 |
| Large intestine | 9.8 |
| Stomach | 8.5 |
| heart | 3.6 |
| ovary | 14.2 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s399842_g24549.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24549.t1 agggaggaaggaggcgaggcctccgccgcctctcctccactctcgcccgaagagcgggtctttcgaggcggcggcaccgg cggcagcgtactactatggccgagaggaatagctctggacccgggagccgggaaggcagcgagccggggaagggctggaa gacggagctaaaggcggtggtggtgggcgacggcggctgcggaaagacttcgctccttttggtgcatgccaaaggcgcct ttcccgagcaatacgccccttcggtctttgaaaaatacacaaccaatgtcgctgtggggaaaaaagaaatagtcttacat ttgtatgatactgcaggacaagaagattatgatcgcttacggccactctcgtaccaaaacactcatgtggttttgatttg ctatgatgtcatgaacccttttagctttgataatgtattaatcaagtggatccatgaagtcaaccacttctgccgcggaa tccctatcctgttggtgggttgcaaaactgatctccggaaagacaaagaacacctcaagaagctccgctctgctcaacag gagccgatcacttacaagcagggcgaagaggcctgttgccagatcggtgccagcatgtacctcgagtgttcagccaagtt tcgggagaacgtcgaatccattttcagcgaagcggctagcatagcgttgaacgccatcaagaaggccaaacgccagaaga aatcaaggccttgtgttcttttatgacgtgaaaccggacaaaggaagacagttggtcttcttccttttctgtgatatgca gggaagcatttgtagttttctatctggatttgaaaaggtacttttcatttggattgtaacaggagaagaaacttggtttg tattaatttctgcttttactggacttttgcatccaatggcgagacgtttcactaggaaggagttcttcctttcccaggtc tttacttctagaagatcactttgctacttcccattttttaaataacaatgttttaaaaagcctctttacgtcatagcagt attaccaaaatgaagtggtccttttcaataaacttttcaaggtgtaacctagagttgcataacatactaaaccatagagt ttgttctgttttgatttaatgcaatatttctcaactgcggcaatgtgaagatctgtggactttcaactcccagaattccc atcaacacactgggagttaaaatctccacatcttcatattgccatggttgagaaatactgattcaatgcatcatttatag cttgcagactgtagtttatgacatacggtggtcattaacttagctgagtgtgctttttcagccaacattagttaaaataa accatcattcaatatgatatatgaatataaaggttgtcatccttccttctgtagtaagctggggacattttaatagataa aaaaagagagtccaataggttagtagttaaactatacagtatggctgagattcgttacttaggtacagtaaaccccaatt caattgggagattcaatcaccaactcctgaagaaatgacttgaaggacctcacaatttgccctgcttgtatctatataga tttctttaggtcgttcctactatttcataaggaatagctacctcgaaatatgcctttatacctggtgctgtgcctttaaa ctatttctagttgaaagttgattctttgtgccaattctctatgtttctgtctttgtaatactctgaactgtacttcaaaa tattttttattttaatagaaaaataaaaatcttcactgaaggggtaaat |
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| Transcript ID | habu1_s399842_g24549.t2 |
| Definition | - |
>habu1_s399842_g24549.t2 agggaggaaggaggcgaggcctccgccgcctctcctccactctcgcccgaagagcgggtctttcgaggcggcggcaccgg cggcagcgtactactatggccgagaggaatagctctggacccgggagccgggaaggcagcgagccggggaagggctggaa gacggagctaaaggcggtggtggtgggcgacggcggctgcggaaagacttcgctccttttggtgcatgccaaaggcgcct ttcccgagcaatacgccccttcggtctttgaaaaatacacaaccaatgtcgctgtggggaaaaaagaaatagtcttacat ttgtatgatactgcaggacaagaagattatgatcgcttacggccactctcgtaccaaaacactcatgtggttttgatttg ctatgatgtcatgaacccttttagctttgataatgtattaatcaagtggatccatgaagtcaaccacttctgccgcggaa tccctatcctgttggtgggttgcaaaactgatctccggaaagacaaagaacacctcaagaagctccgctctgctcaacag gagccgatcacttacaagcagggcgaagaggcctgttgccagatcggtgccagcatgtacctcgagtgttcagccaagtt tcgggagaacgtcgaatccattttcagcgaagcggctagcatagcgttgaacgccatcaagaaggccaaacgccagaaga aatcaaggccttgtgttcttttatgacgtgaaaccggacaaaggaagacagttggtcttcttccttttctgtgatatgca gggaagcatttgtagttttctatctggatttgaaaaggtacttttcatttggattgtaacaggagaagaaacttggtttg tattaatttctgcttttactggacttttgcatccaatggcgagacgtttcactaggaaggagttcttcctttcccaggtc tttacttctagaagatcactttgctacttcccattttttaaataacaatgttttaaaaagcctctttacgtcatagcagt attaccaaaatgaagtggtccttttcaataaacttttcaaggtgtaacctagag |
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Protein
| Protein ID | habu1_s399842_g24549.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24549.t1 MAERNSSGPGSREGSEPGKGWKTELKAVVVGDGGCGKTSLLLVHAKGAFPEQYAPSVFEKYTTNVAVGKKEIVLHLYDTA GQEDYDRLRPLSYQNTHVVLICYDVMNPFSFDNVLIKWIHEVNHFCRGIPILLVGCKTDLRKDKEHLKKLRSAQQEPITY KQGEEACCQIGASMYLECSAKFRENVESIFSEAASIALNAIKKAKRQKKSRPCVLL |
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| Protein ID | habu1_s399842_g24549.t2 |
| Definition | - |
>habu1_s399842_g24549.t2 MAERNSSGPGSREGSEPGKGWKTELKAVVVGDGGCGKTSLLLVHAKGAFPEQYAPSVFEKYTTNVAVGKKEIVLHLYDTA GQEDYDRLRPLSYQNTHVVLICYDVMNPFSFDNVLIKWIHEVNHFCRGIPILLVGCKTDLRKDKEHLKKLRSAQQEPITY KQGEEACCQIGASMYLECSAKFRENVESIFSEAASIALNAIKKAKRQKKSRPCVLL |
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