Gene
| Gene Model ID | habu1_s399842_g24551 |
|---|---|
| Locus | habu1_scaffold399842 : 205391 ... 215285 : - |
| To GenomeBrowser | habu1_scaffold399842:205391..215285 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | EC:1.13.11.27 GO:0003868 GO:0006558 GO:0006570 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24551.t1 | 2 | 1 | Glyoxalase | 31 | 141 | 5.6e-24 | 84.5 | 2.2e-10 | 6.6e-07 | 29.3 |
| habu1_s399842_g24551.t1 | 2 | 1 | Glyoxalase_4 | 34 | 137 | 1.8e-12 | 47.2 | 3.3e-09 | 9.9e-06 | 25.5 |
| habu1_s399842_g24551.t1 | 1 | 1 | Glyoxalase_2 | 37 | 139 | 4.5e-11 | 43.3 | 1.1e-10 | 3.3e-07 | 30.8 |
| habu1_s399842_g24551.t1 | 2 | 2 | Glyoxalase | 192 | 346 | 5.6e-24 | 84.5 | 7.3e-18 | 2.2e-14 | 53.5 |
| habu1_s399842_g24551.t1 | 2 | 2 | Glyoxalase_4 | 247 | 303 | 1.8e-12 | 47.2 | 2.6e-07 | 0.00078 | 19.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24551.t1 | gi|637357617|ref|XP_003227978.2| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24551.t1 | gi|564227124|ref|XP_006258030.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Alligator mississippiensis] | 0.0 |
| habu1_s399842_g24551.t1 | gi|557259130|ref|XP_006015255.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s399842_g24551.t1 | gi|675422768|ref|XP_008924989.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Manacus vitellinus] | 0.0 |
| habu1_s399842_g24551.t1 | gi|733911753|ref|XP_010718433.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 7.8 |
| Nose | 4.7 |
| Brain-1 | 0.3 |
| Eye | 8.1 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 1.7 |
| Brain-2 | 0.3 |
| Spleen | 3.3 |
| Lung | 22.6 |
| Liver | 9983.1 |
| Kidney | 399.9 |
| Pancreas | 71.6 |
| Small intestine | 0.2 |
| Large intestine | 1.2 |
| Stomach | 1.0 |
| heart | 0.8 |
| ovary | 1.0 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s399842_g24551.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24551.t1 gttgagaaatatcaagagttgtgtttaaaaagttaaaatgtacatctggaagaggaggaggaggaggaggagatgtgggg aggagctggggccctcctctttttacatttcaaaagatttccacactgtctctctacctctttctgccttcccaccttct gtttcttcggctgcaaggaaagaccaaaatgacaacctatacagataaaggagaaaagataaatttaacaatcctcttga aatggatgaggcttcaaaaggttgaactttgcctggagtttacaaacagggatctgtgctttgttaaactctaaacccag cttgtaatgtctgtatcagaccaagggctaagttgcttgccgagaaggaaatgcaaccgaatccagcagccggccagagg ccgattcctgaacttccactccttaaccttctgggttggcaatgccaaacaggctgcatccttttactgcaacaaaatgg ggtttgaagaactggcctaccgaggcttggagactggcagccgagaggtggtttcccacgtgatcaagcaggataagatt atatttgttttctcctcggcccttaatcctggcaatgaagaaatgggacagcacttaatagagcacggagatggcgtcaa agatgttgccttcgaagtggaggactgcgattccattgtgaagaaagcccgagaacgtggagctcggatagtacgagagc cctggacagaagaagacaagcacgggaaagtgaaatttgcagtcgtgcaaacgtatggagacaccacccacacactcata gagaaacagaactacaaaggactcttcttacctggatttgaagctcctctctttaaggacccgctcttaaaaaaactacc tgctgcaaaactgaagtttattgatcacattgtggggaatcagcctgaccaggagatgctctctgtggtagaatggtatc agaagaatctccagttccatcgcttctggtctgtggatgacaaacaactgcacaccgaattcagtgccctgcggtctgtg gttatggccaattatgaggagaccatcaaaatgcccatcaatgaacctgcaatgggcaagaagaaatctcagatccagga atacgtggactattatggaggccctggagtccagcacatcgccctgaacacctcagacatcatcacttcgatcacaaact tgaaagaccgtggcatggagttcatgtccgttccatcaaagtactaccagcagctccgggagcggctgaagacagccaag atcaaagtgaaggaaagcattgacaaactggaggaactcaaaatcttaattgactttgacgagaagggctacctgcttca gatcttcaccaagcccgttcaggacaggccgaccgtcttccttgaggtcattcagcgctacaaccatgagggttttggag caggaaacttcaagtctctgtttgaagctattgaaattgaccaagatgctcggggaaacctcaacattctgacgcccgac ggagagtccaaactcatgtaacgtccatcagccccaaagggagatgtcctcagagtgaaatgtgacgggcaaagattaca caccgatcttccattgtaaccagatcttttttgtcaaattaaaaaaaaattgagcttcttgcagt |
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Protein
| Protein ID | habu1_s399842_g24551.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24551.t1 MSVSDQGLSCLPRRKCNRIQQPARGRFLNFHSLTFWVGNAKQAASFYCNKMGFEELAYRGLETGSREVVSHVIKQDKIIF VFSSALNPGNEEMGQHLIEHGDGVKDVAFEVEDCDSIVKKARERGARIVREPWTEEDKHGKVKFAVVQTYGDTTHTLIEK QNYKGLFLPGFEAPLFKDPLLKKLPAAKLKFIDHIVGNQPDQEMLSVVEWYQKNLQFHRFWSVDDKQLHTEFSALRSVVM ANYEETIKMPINEPAMGKKKSQIQEYVDYYGGPGVQHIALNTSDIITSITNLKDRGMEFMSVPSKYYQQLRERLKTAKIK VKESIDKLEELKILIDFDEKGYLLQIFTKPVQDRPTVFLEVIQRYNHEGFGAGNFKSLFEAIEIDQDARGNLNILTPDGE SKLM |
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