Gene
| Gene Model ID | habu1_s399842_g24552 |
|---|---|
| Locus | habu1_scaffold399842 : 217046 ... 220446 : + |
| To GenomeBrowser | habu1_scaffold399842:217046..220446 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 26s proteasome non-atpase regulatory subunit 9 | GO:0000502 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24552.t1 | 1 | 1 | PDZ | 110 | 174 | 3.6e-06 | 27.0 | 2.9e-09 | 8.5e-06 | 25.8 |
| habu1_s399842_g24552.t1 | 1 | 1 | PDZ_2 | 119 | 183 | 1.9e-07 | 30.9 | 1.2e-10 | 3.7e-07 | 29.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24552.t1 | gi|602631834|ref|XP_007422814.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Python bivittatus] | 0.0 |
| habu1_s399842_g24552.t1 | gi|327286510|ref|XP_003227973.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24552.t1 | gi|564227126|ref|XP_006258031.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Alligator mississippiensis] | 0.0 |
| habu1_s399842_g24552.t1 | gi|719792543|ref|XP_010224161.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Tinamus guttatus] | 0.0 |
| habu1_s399842_g24552.t1 | gi|557259126|ref|XP_006015253.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 31.4 |
| Venom grand-1 | 155.9 |
| Pit, infrared sensing | 44.1 |
| Nose | 30.0 |
| Brain-1 | 21.4 |
| Eye | 43.5 |
| fetal fibroblast | 45.9 |
| venom gland-2 | 80.9 |
| Brain-2 | 22.0 |
| Spleen | 56.7 |
| Lung | 52.8 |
| Liver | 133.6 |
| Kidney | 68.1 |
| Pancreas | 166.4 |
| Small intestine | 55.7 |
| Large intestine | 43.2 |
| Stomach | 58.4 |
| heart | 49.8 |
| ovary | 37.2 |
| cheek muscle | 193.6 |
Transcript
| Transcript ID | habu1_s399842_g24552.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24552.t1 tagtttctgccacaggcctcccagcctggagcgtttgtggcgttttctccggaaaatgtctctgcaggagccgccggtga cggtcagcgacctgcagcagctgctgaagaagaaggacgaaattgaggcccagatcaaggcctactatgaagtcctgcag gatcaaaaaggggttggaatgagtgagccactcgtagacgctgatggctaccctcgggcagatgtggacatctaccaagt ccggaccgcgagacacaacatcatctgtctgcagaacgaccaccaagccctgatggagcaggtggaagagggactgcatc agctacacgcccgagagaaagagaagcgtgaccaggatgaggccgaggctcgtgccgaagcccaaagccaggccttgccc cagcccttcgcccgagtgaacgccgtcagtcccggctccccagccagcttcgcgggtttacaagtgggcgacgagatcgc cgagtttggctcggttaacagccagaatttccaatcgttgcagaacattgcaaccgtggttcagcacagtgaggacaaac ccttaagggtgactgtgattcgaaaaggggaaaaaacccatctggggctgaccccaaagcgctggagtgggaaaggactt ctgggttgtagtattgttcctttgcaaagatgactttgactgatgatccaactcgtgtttttttggtgacatgtcatttt gatgttagcatctctccgaagaagctgaaatggctaaaatgaatttggaatttggggcttttactgtatttcctgcagat gccatttgaatttttcccccctgattcccaaaaggtattcagtatgttttaacttgggtgtaaggacaagttgctcaatt catggtggaattgagcaactcagttttgtgtccttcccttggattcttccctgtttggtccaggaactggacaataaaga tttatgccattctcctgatg |
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Protein
| Protein ID | habu1_s399842_g24552.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24552.t1 MSLQEPPVTVSDLQQLLKKKDEIEAQIKAYYEVLQDQKGVGMSEPLVDADGYPRADVDIYQVRTARHNIICLQNDHQALM EQVEEGLHQLHAREKEKRDQDEAEARAEAQSQALPQPFARVNAVSPGSPASFAGLQVGDEIAEFGSVNSQNFQSLQNIAT VVQHSEDKPLRVTVIRKGEKTHLGLTPKRWSGKGLLGCSIVPLQR |
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