Gene
| Gene Model ID | habu1_s399842_g24555 |
|---|---|
| Locus | habu1_scaffold399842 : 273556 ... 281508 : + |
| To GenomeBrowser | habu1_scaffold399842:273556..281508 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24555.t2 | 3 | 1 | LRR_4 | 97 | 128 | 1.5e-13 | 50.0 | 9.4e-06 | 0.023 | 14.3 |
| habu1_s399842_g24555.t2 | 3 | 2 | LRR_4 | 111 | 152 | 1.5e-13 | 50.0 | 1.8e-08 | 4.5e-05 | 22.9 |
| habu1_s399842_g24555.t2 | 2 | 1 | LRR_8 | 111 | 167 | 1.8e-11 | 43.5 | 4.3e-10 | 1.1e-06 | 28.3 |
| habu1_s399842_g24555.t2 | 2 | 2 | LRR_8 | 237 | 279 | 1.8e-11 | 43.5 | 9.6e-07 | 0.0024 | 17.5 |
| habu1_s399842_g24555.t2 | 3 | 3 | LRR_4 | 242 | 281 | 1.5e-13 | 50.0 | 8.0e-11 | 2.0e-07 | 30.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.3 |
| Nose | 3.7 |
| Brain-1 | 0.7 |
| Eye | 0.2 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.4 |
| Spleen | 0.2 |
| Lung | 1.0 |
| Liver | 0.2 |
| Kidney | 0.2 |
| Pancreas | 0.2 |
| Small intestine | 0.2 |
| Large intestine | 0.4 |
| Stomach | 0.5 |
| heart | 0.1 |
| ovary | 0.2 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s399842_g24555.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24555.t1 aagaacacaacaaaataattttatgaaaatcaaaattaaaataaaatcttatccgttggaagtgcagtgaggaggagaac tgcaactgttgttcatctctagcaacctttcccgccagccaggtgctgggggacgatggacgctgtagtctctggaaggg gccaacttaggtaacgttggtgcctattgtgggtgtttaaaacacaggttaaccacctgcgggtgaacacaggagactcc gcccccttggagagccggcagcatctccctcccctggcgtcagtgggcgcccctagcaaccagatcccgtatcctagcaa cggaagaagcggcctggtcctgctgcagccgccatgccatggaagggctgagcgcctcgggagctttctgggatcacctt cgccagctgtgcctggaccagtttccttgtggggtggggagctggaataaatcccggttcccccctcgcctgccccccca aacgacggagaccctgacggagttcctgcgctgcccagactccccctgggccttgccccccgactgcagcccccccgagc agcagctgcgggagctggccgtgcagcacccccagatcgtccggaccagcttcgtctgctcctacttcaggtcgctccgg atcgtgaacaaaggggtgaccgaaatcgatgtgggtttattaaatttccccaatttggaagagctgatcttaacggcaaa ccatatcagcaccatcccggctgccaatctccctccgggcctcaaggtgctggagctttgtggcaatgaggtgcagagtt taaaagacctgtgcacatcccccccagctggactgcagcatctgggtctcagccacaactgccagctcggttcctcggag gaacaatatttggcagctgttttctgttgccctggagaaaggagagcagggcagggggcttcacacaggatggagggagc aaaggaacctctcagacgccgccgatgggttgaaatccccctccaggcatccagaggtaacgtcatcagcgcagcagggg tgacgttacttagctgggtcatgaaaagtctgcaaaaagggcccaacctggtctctctggacttgagctacaacaacttc accgacctactgagcctccttcccacgctatccagcttgaaaaagctccggatcctcgtcctgcagggaaacccctttgc cctccttccgggttaccgaggttttaccatcgacagcctgccccacatctctgtcttcgatgacatcatcatcaccccag aggagaggcaccgtttcctcaagctgtccacattcccagaggccttactctcggatgtcaaactgatcgtcgccattggc aaaatgcggggtctccccaacccactcaacccagaggaactggagagcagtcctgactccccaatcgtcactcacagcta ctacgtgacgtatgaatttgccaagggtgaagaaaaaggggagaaggcagccagcaagcacaggagagcattgaccgccg gagacgtggcgagctcacccttagtggcggtggatggagagacaactgagcccctgtcttctcagccttcgcccaagctg gacctgcagcccgagccaggagcaaatacgcactcaactgccaagaagggctgggcagaggccattgactgcgattaccg aaaagagcatctcgcccaggatctggttgctctcaaggcttatcttcttgctggaaccaccgtctccgttgttgaggaaa agagcaatgaaacacaccttttccaggttgtctcctggcctgtggtcctgactcctgaagaaaaaacaagcaagaaagga aaggggaagggaggagagaaaggaaaagccgattcaggaaaggcagacaaagggaaggagaaagggaaggagaaagacac cggaaagggtgggaacaaaaagaaaaagaaagccccttccccagagctccgaagcgacccccccatcgtgaggaccctgg gctcccttcacatcagcttagagaaactgctagccggggcatcgttgctggagaccacctgtgatttcggggtgcagata accgagcggagcgtctccctgccgtcgcccaaagacaaggagagcaagaaaggtgcaaaaaaagacgccaaagccaaatc tgggaccgacagcgcaacctctcgaaaaacacccccacccccaaccccctcccctaccaggggaaaggggcggaagaagg actctccagagggacccgattcgcaactcagccagcccgtgcctttgactgtggagtttcagatgcaacacatcaagtgg gaatcggcttcccccatcttaaaaatgcaggaagcctcagaatagggttgcagagagcaagaccagtttggctcttaaga gacgaggaggctctgggtgcacattctgaggctggtcctttcctgagtgatgtggctcttcgctgctttatgcaatctat agaatc |
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| Transcript ID | habu1_s399842_g24555.t2 |
| Definition | - |
>habu1_s399842_g24555.t2 aagaacacaacaaaataattttatgaaaatcaaaattaaaataaaatcttatccgttggaagtgcagtgaggaggagaac tgcaactgttgttcatctctagcaacctttcccgccagccaggtgctgggggacgatggacgctgtagtctctggaaggg gccaacttaggtaacgttggtgcctattgtgggtgtttaaaacacaggttaaccacctgcgggtgaacacaggagactcc gcccccttggagagccggcagcatctccctcccctggcgtcagtgggcgcccctagcaaccagatcccgtatcctagcaa cggaagaagcggcctggtcctgctgcagccgccatgccatggaagggctgagcgcctcgggagctttctgggatcacctt cgccagctgtgcctggaccagtttccttgtggggtggggagctggaataaatcccggttcccccctcgcctgccccccca aacgacggagaccctgacggagttcctgcgctgcccagactccccctgggccttgccccccgactgcagcccccccgagc agcagctgcgggagctggccgtgcagcacccccagatcgtccggaccagcttcgtctgctcctacttcaggtcgctccgg atcgtgaacaaaggggtgaccgaaatcgatgtgggtttattaaatttccccaatttggaagagctgatcttaacggcaaa ccatatcagcaccatcccggctgccaatctccctccgggcctcaaggtgctggagctttgtggcaatgaggtgcagagtt taaaagacctgtgcacatcccccccagctggactgcagcatctgggtctcagccacaactgccagctcggttcctcggag gaacaatatttggcagctgttttctgttgccctggagaaaggagagcagggcagggggcttcacacaggatggagggagc aaaggaacctctcagacgccgccgatgggttgaaatccccctccaggcatccagaggtaacgtcatcagcgcagcagggg tgacgttacttagctgggtcatgaaaagtctgcaaaaagggcccaacctggtctctctggacttgagctacaacaacttc accgacctactgagcctccttcccacgctatccagcttgaaaaagctccggatcctcgtcctgcagggaaacccctttgc cctccttccgggttaccgaggttttaccatcgacagcctgccccacatctctgtcttcgatgacatcatcatcaccccag aggagaggcaccgtttcctcaagctgtccacattcccagaggccttactctcggatgtcaaactgatcgtcgccattggc aaaatgcggggtctccccaacccactcaacccagaggaactggagagcagtcctgactccccaatcgtcactcacagcta ctacgtgacgtatgaatttgccaagggtgaagaaaaaggggagaaggcagccagcaagcacaggagagcattgaccgccg gagacgtggcgagctcacccttagtggcggtggatggagagacaactgagcccctgtcttctcagccttcgcccaagctg gacctgcagcccgagccaggagcaaatacgcactcaactgccaagaagggctgggcagaggccattgactgcgattaccg aaaagagcatctcgcccaggatctggttgctctcaaggcttatcttcttgctggaaccaccgtctccgttgttgaggaaa aggttgtctcctggcctgtggtcctgactcctgaagaaaaaacaagcaagaaaggaaaggggaagggaggagagaaagga aaagccgattcaggaaaggcagacaaagggaaggagaaagggaaggagaaagacaccggaaagggtgggaacaaaaagaa aaagaaagccccttccccagagctccgaagcgacccccccatcgtgaggaccctgggctcccttcacatcagcttagaga aactgctagccggggcatcgttgctggagaccacctgtgatttcggggtgcagataaccgagcggagcgtctccctgccg tcgcccaaagacaaggagagcaagaaaggtgcaaaaaaagacgccaaagccaaatctgggaccgacagcgcaacctctcg aaaaacacccccacccccaaccccctcccctaccaggggaaaggggcggaagaaggactctccagagggacccgattcgc aactcagccagcccgtgcctttgactgtggagtttcagatgcaacacatcaagtgggaatcggcttcccccatcttaaaa atgcaggaagcctcagaatagggttgcagagagcaagaccagtttggctcttaagagacgaggaggctctgggtgcacat tctgaggctggtcctttcctgagtgatgtggctcttcgctgctttatgcaatctatagaatc |
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Protein
| Protein ID | habu1_s399842_g24555.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24555.t1 MEGLSASGAFWDHLRQLCLDQFPCGVGSWNKSRFPPRLPPQTTETLTEFLRCPDSPWALPPDCSPPEQQLRELAVQHPQI VRTSFVCSYFRSLRIVNKGVTEIDVGLLNFPNLEELILTANHISTIPAANLPPGLKVLELCGNEVQSLKDLCTSPPAGLQ HLGLSHNCQLGSSEEQYLAAVFCCPGERRAGQGASHRMEGAKEPLRRRRWVEIPLQASRGNVISAAGVTLLSWVMKSLQK GPNLVSLDLSYNNFTDLLSLLPTLSSLKKLRILVLQGNPFALLPGYRGFTIDSLPHISVFDDIIITPEERHRFLKLSTFP EALLSDVKLIVAIGKMRGLPNPLNPEELESSPDSPIVTHSYYVTYEFAKGEEKGEKAASKHRRALTAGDVASSPLVAVDG ETTEPLSSQPSPKLDLQPEPGANTHSTAKKGWAEAIDCDYRKEHLAQDLVALKAYLLAGTTVSVVEEKSNETHLFQVVSW PVVLTPEEKTSKKGKGKGGEKGKADSGKADKGKEKGKEKDTGKGGNKKKKKAPSPELRSDPPIVRTLGSLHISLEKLLAG ASLLETTCDFGVQITERSVSLPSPKDKESKKGAKKDAKAKSGTDSATSRKTPPPPTPSPTRGKGRKKDSPEGPDSQLSQP VPLTVEFQMQHIKWESASPILKMQEASE |
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| Protein ID | habu1_s399842_g24555.t2 |
| Definition | - |
>habu1_s399842_g24555.t2 MEGLSASGAFWDHLRQLCLDQFPCGVGSWNKSRFPPRLPPQTTETLTEFLRCPDSPWALPPDCSPPEQQLRELAVQHPQI VRTSFVCSYFRSLRIVNKGVTEIDVGLLNFPNLEELILTANHISTIPAANLPPGLKVLELCGNEVQSLKDLCTSPPAGLQ HLGLSHNCQLGSSEEQYLAAVFCCPGERRAGQGASHRMEGAKEPLRRRRWVEIPLQASRGNVISAAGVTLLSWVMKSLQK GPNLVSLDLSYNNFTDLLSLLPTLSSLKKLRILVLQGNPFALLPGYRGFTIDSLPHISVFDDIIITPEERHRFLKLSTFP EALLSDVKLIVAIGKMRGLPNPLNPEELESSPDSPIVTHSYYVTYEFAKGEEKGEKAASKHRRALTAGDVASSPLVAVDG ETTEPLSSQPSPKLDLQPEPGANTHSTAKKGWAEAIDCDYRKEHLAQDLVALKAYLLAGTTVSVVEEKVVSWPVVLTPEE KTSKKGKGKGGEKGKADSGKADKGKEKGKEKDTGKGGNKKKKKAPSPELRSDPPIVRTLGSLHISLEKLLAGASLLETTC DFGVQITERSVSLPSPKDKESKKGAKKDAKAKSGTDSATSRKTPPPPTPSPTRGKGRKKDSPEGPDSQLSQPVPLTVEFQ MQHIKWESASPILKMQEASE |
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