Gene
| Gene Model ID | habu1_s399842_g24560 |
|---|---|
| Locus | habu1_scaffold399842 : 348747 ... 351985 : - |
| To GenomeBrowser | habu1_scaffold399842:348747..351985 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger cchc domain-containing protein 8 isoform x1 | GO:0003676 GO:0005634 GO:0046872 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24560.t1 | gi|637349672|ref|XP_008118072.1| | PREDICTED: zinc finger CCHC domain-containing protein 8 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24560.t1 | gi|641796938|ref|XP_008161790.1| | PREDICTED: zinc finger CCHC domain-containing protein 8 isoform X4 [Chrysemys picta bellii] | 0.0 |
| habu1_s399842_g24560.t1 | gi|641796940|ref|XP_008161791.1| | PREDICTED: zinc finger CCHC domain-containing protein 8 isoform X5 [Chrysemys picta bellii] | 0.0 |
| habu1_s399842_g24560.t1 | gi|530617889|ref|XP_005298672.1| | PREDICTED: zinc finger CCHC domain-containing protein 8 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 2.6 |
| Pit, infrared sensing | 3.5 |
| Nose | 4.4 |
| Brain-1 | 2.1 |
| Eye | 3.7 |
| fetal fibroblast | 4.6 |
| venom gland-2 | 6.2 |
| Brain-2 | 2.5 |
| Spleen | 4.6 |
| Lung | 7.0 |
| Liver | 5.1 |
| Kidney | 5.6 |
| Pancreas | 7.2 |
| Small intestine | 4.6 |
| Large intestine | 3.4 |
| Stomach | 3.3 |
| heart | 2.9 |
| ovary | 7.4 |
| cheek muscle | 4.8 |
Transcript
| Transcript ID | habu1_s399842_g24560.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24560.t1 agcggccttcgcctcctcctctccctcgtccatcgagcctcgcctcgccaagatggcggccgaggtggacttcggcgacc gcgagcttttccagcagctggaggacgacgaagaggcgcccagcgcggggccaggcccggcggaagaggcggcggagctc cgcgagcggctgagagactcggaggagaccgaactcaaaagaaaactgaacatcctgactcgaccaagtggactaacagt ggatgactataaacttgatgggcctttgttacagatcttgttcatgaataatactgtttcaaagcaatatcatcaagaaa tagaagagtttgtatccaatttaattcagagatacgaggagcgacagaggagcgaattggacaaggcctgcttcaatgtt aaaccgcagccttctagctttgtcctggaagaagatcataaagtaacaagctcaaatctgtccaaaaaagtcaaagaggc ttttagtgttgtaggaagtgttctctattttaccaatttttgtcttgataaactggggcagcctatattaaatgaaaatc ctcagctcacagatggatgggaaatacccaagtatcctatttagttaactgtcgttcccttttcctgttaacgcaataag tctaaaacaaattgggttccacttacatattttcagttcctgttaatgcaataagtctaaaacagattggtttccactta tatattttcagcatcttagtgccctaactctttcgtcatttgtttcaataaaacatttccacagggtgcatttc |
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Protein
| Protein ID | habu1_s399842_g24560.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24560.t1 MAAEVDFGDRELFQQLEDDEEAPSAGPGPAEEAAELRERLRDSEETELKRKLNILTRPSGLTVDDYKLDGPLLQILFMNN TVSKQYHQEIEEFVSNLIQRYEERQRSELDKACFNVKPQPSSFVLEEDHKVTSSNLSKKVKEAFSVVGSVLYFTNFCLDK LGQPILNENPQLTDGWEIPKYPI |
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