Gene
| Gene Model ID | habu1_s399842_g24563 |
|---|---|
| Locus | habu1_scaffold399842 : 388105 ... 392565 : - |
| To GenomeBrowser | habu1_scaffold399842:388105..392565 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein sorting-associated protein 29 isoform x1 | GO:0005769 GO:0005770 GO:0006886 GO:0006896 GO:0008270 GO:0008565 GO:0010008 GO:0030904 GO:0042147 GO:0070062 GO:1990126 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24563.t2 | 1 | 1 | Metallophos_2 | 1 | 156 | 1.9e-19 | 70.0 | 2.9e-23 | 2.1e-19 | 69.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24563.t2 | gi|327284383|ref|XP_003226917.1| | PREDICTED: vacuolar protein sorting-associated protein 29 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24563.t2 | gi|602631804|ref|XP_007422799.1| | PREDICTED: vacuolar protein sorting-associated protein 29 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s399842_g24563.t2 | gi|9790285|ref|NP_062754.1| | vacuolar protein sorting-associated protein 29 [Mus musculus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 44.5 |
| Venom grand-1 | 47.3 |
| Pit, infrared sensing | 50.7 |
| Nose | 46.2 |
| Brain-1 | 30.7 |
| Eye | 32.5 |
| fetal fibroblast | 92.1 |
| venom gland-2 | 55.7 |
| Brain-2 | 34.1 |
| Spleen | 40.8 |
| Lung | 41.3 |
| Liver | 36.3 |
| Kidney | 50.1 |
| Pancreas | 42.0 |
| Small intestine | 40.2 |
| Large intestine | 42.4 |
| Stomach | 35.2 |
| heart | 43.3 |
| ovary | 73.1 |
| cheek muscle | 41.0 |
Transcript
| Transcript ID | habu1_s399842_g24563.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24563.t1 ccggaagcggcgaaaaacggggcccgaaggagcggcgctgaggctaccgagatggctgggcacagattggtgttagtgtt gggcgaccttcatattcctcaccgctgtaacagcctgccggctaaattcaaaaagttgctggttccgggcaaaatccagc acattctttgcaccgggaacctttgcacgaaggagagctatgactacctgaagaccttggctggcgacgttcacgtcgtg agaggagattttgatgagaatctgaattatcctgaacagaaagtggtcactgtggggcagtttaagattgggctgatcca cggccatcaagtcattccctggggtgacgtggccagcctcgctctcctgcagcggcagtttgacgtcgacatcctgattt cgggccacacaaacaaatttgaggcatttgaacatgaaaacaagttctacattaacccaggttcagcaacaggagcctac agcgctttggaaaacaacatcatcccttcgtttgtgctgatggacatccaggcctctacggttgttacctacgtttatca gctgattggcgatgacgtgaaagtagaaagaatcgaatacaagaaatcttaaaagcaaggggtcctcacctaactcattc caggtttttttttttgtttgcaatacacatccaacactctgcagagtttgtagcctcaagaattgacaaggttacttctc ttaccctgttgtaggcaactaagtttacctgacctctgacaaaatctggcttggtttagcttccccccccccttttggcc tcccaaatcagctcctgcttgtaaatactactcaaagtgtgcagcagaattctacctgttcatgtgaactgtcttattca actgtcctataataaatactacttcggtttgataaaga |
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| Transcript ID | habu1_s399842_g24563.t2 |
| Definition | - |
>habu1_s399842_g24563.t2 ccggaagcggcgaaaaacggggcccgaaggagcggcgctgaggctaccgagatgttggtgttagtgttgggcgaccttca tattcctcaccgctgtaacagcctgccggctaaattcaaaaagttgctggttccgggcaaaatccagcacattctttgca ccgggaacctttgcacgaaggagagctatgactacctgaagaccttggctggcgacgttcacgtcgtgagaggagatttt gatgagaatctgaattatcctgaacagaaagtggtcactgtggggcagtttaagattgggctgatccacggccatcaagt cattccctggggtgacgtggccagcctcgctctcctgcagcggcagtttgacgtcgacatcctgatttcgggccacacaa acaaatttgaggcatttgaacatgaaaacaagttctacattaacccaggttcagcaacaggagcctacagcgctttggaa aacaacatcatcccttcgtttgtgctgatggacatccaggcctctacggttgttacctacgtttatcagctgattggcga tgacgtgaaagtagaaagaatcgaatacaagaaatcttaaaagcaaggggtcctcacctaactcattccaggtttttttt tttgtttgcaatacacatccaacactctgcagagtttgtagcctcaagaattgacaaggttacttctcttaccctgttgt aggcaactaagtttacctgacctctgacaaaatctggcttggtttagcttccccccccccttttggcctcccaaatcagc tcctgcttgtaaatactactcaaagtgtgcagcagaattctacctgttcatgtgaactgtcttattcaactgtcctataa taaatactacttcggtttgataaaga |
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Protein
| Protein ID | habu1_s399842_g24563.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24563.t1 MAGHRLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHVVRGDFDENLNYPEQKVVT VGQFKIGLIHGHQVIPWGDVASLALLQRQFDVDILISGHTNKFEAFEHENKFYINPGSATGAYSALENNIIPSFVLMDIQ ASTVVTYVYQLIGDDVKVERIEYKKS |
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| Protein ID | habu1_s399842_g24563.t2 |
| Definition | - |
>habu1_s399842_g24563.t2 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHVVRGDFDENLNYPEQKVVTVGQF KIGLIHGHQVIPWGDVASLALLQRQFDVDILISGHTNKFEAFEHENKFYINPGSATGAYSALENNIIPSFVLMDIQASTV VTYVYQLIGDDVKVERIEYKKS |
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