Gene
| Gene Model ID | habu1_s399842_g24564 |
|---|---|
| Locus | habu1_scaffold399842 : 392906 ... 401394 : + |
| To GenomeBrowser | habu1_scaffold399842:392906..401394 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cell cycle checkpoint control protein rad9b isoform x1 | GO:0000077 GO:0006281 GO:0030896 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24564.t1 | 1 | 1 | Rad9 | 13 | 270 | 0.0 | 294.8 | 0.0 | 0.0 | 294.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24564.t1 | gi|602631798|ref|XP_007422796.1| | PREDICTED: cell cycle checkpoint control protein RAD9B isoform X1 [Python bivittatus] | 0.0 |
| habu1_s399842_g24564.t1 | gi|591367168|ref|XP_007058436.1| | PREDICTED: cell cycle checkpoint control protein RAD9B [Chelonia mydas] | 0.0 |
| habu1_s399842_g24564.t1 | gi|557259115|ref|XP_006015248.1| | PREDICTED: cell cycle checkpoint control protein RAD9B [Alligator sinensis] | 0.0 |
| habu1_s399842_g24564.t1 | gi|327284387|ref|XP_003226919.1| | PREDICTED: cell cycle checkpoint control protein RAD9B isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24564.t1 | gi|564257507|ref|XP_006267705.1| | PREDICTED: cell cycle checkpoint control protein RAD9B [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 1.4 |
| Nose | 1.1 |
| Brain-1 | 0.2 |
| Eye | 0.3 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.4 |
| Brain-2 | 0.2 |
| Spleen | 0.0 |
| Lung | 0.4 |
| Liver | 1.2 |
| Kidney | 0.4 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 1.9 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s399842_g24564.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24564.t1 ttgcaaaagagccggaagtggtagctccaccgaaaaaggtcttttccccatcattcccaccctctaagacttccctgagt tctcgtgatatgtcctccaggcgagatttgacgtttttgtcttgaggcggggacctttcagacgttctccagacacgcgt gttggggaggggcatcgctcttcttttcattatgaagtgtgtcattgggggcgcccgtgtcagagtgtttgggagggctc tgcacgccattgcgagaatcagcgatgaattttggattgaccccaaggaaaaaggacttttcctgaggacggtaaataat tctagatcagcctatgcctgtgtcttcttttcatctgccttcttccaaaattattcctatggaaatgcctctgaactgag cctgaatgggaacactgttcaactcgcatgcaaattaataataaaagccattctgcctttgtttcgatgcttgcacacgc tggaaagaaatgtggaagagtgcaacatttatacagacgtgagcgattgccatattgtttttaagctattctacaaacac ggtgtcgtgaaaactcacagcttagctttccaggaatgtgaacctcttcaagctgtgtttgcaaaacatttgtgtaccaa tgtactgacagtccaatccaggcagctgtctgacatcttgatccattttccgatgtaccaagaagaaataactttaggtg taacaccaatgaaagtttgcttcaagacttatctagaggatgagatggaatttgcaaaggcaacgcatacggaaattcat ctcagtcctgacgaatttgagtattttcaagtcggagtggattcggaagtcacattttgccttaaagagctgcggggtct gctggtgtttgcagaggctgtcggtgccccagtctccattcattttgatgtttctggaaagccggttgccttcagcattg aggatacggtaatagaagccctgtttgtgctggccactttatccgataccgaaagctgcacaacggctagtaaaccaaca tgccttgaacaaggccagaacaggagaggaaccaactgatcccagctacaataaggtaagttacaggtcacgatagtctc atttaacaagaaaacagcatcctcattagataagctatccttgtctcaggagaaggaaaaataaaacaaaataaaaatgc aaaaaaa |
|
Protein
| Protein ID | habu1_s399842_g24564.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24564.t1 MKCVIGGARVRVFGRALHAIARISDEFWIDPKEKGLFLRTVNNSRSAYACVFFSSAFFQNYSYGNASELSLNGNTVQLAC KLIIKAILPLFRCLHTLERNVEECNIYTDVSDCHIVFKLFYKHGVVKTHSLAFQECEPLQAVFAKHLCTNVLTVQSRQLS DILIHFPMYQEEITLGVTPMKVCFKTYLEDEMEFAKATHTEIHLSPDEFEYFQVGVDSEVTFCLKELRGLLVFAEAVGAP VSIHFDVSGKPVAFSIEDTVIEALFVLATLSDTESCTTASKPTCLEQGQNRRGTN |
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