Gene
| Gene Model ID | habu1_s399842_g24568 |
|---|---|
| Locus | habu1_scaffold399842 : 437177 ... 450387 : - |
| To GenomeBrowser | habu1_scaffold399842:437177..450387 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase pp1-gamma catalytic subunit | GO:0000777 GO:0001525 GO:0004722 GO:0005730 GO:0005739 GO:0005925 GO:0005977 GO:0006470 GO:0007067 GO:0007084 GO:0016020 GO:0016607 GO:0019901 GO:0030496 GO:0032154 GO:0032922 GO:0043153 GO:0044822 GO:0046872 GO:0047485 GO:0051301 GO:0070688 GO:0072357 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24568.t1 | 1 | 1 | Metallophos | 3 | 190 | 5.89947e-43 | 146.6 | 0.0 | 7.30076e-43 | 146.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24568.t1 | gi|602631792|ref|XP_007422793.1| | PREDICTED: serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform X2 [Python bivittatus] | 0.0 |
| habu1_s399842_g24568.t1 | gi|558206130|ref|XP_006132646.1| | PREDICTED: serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Pelodiscus sinensis] | 0.0 |
| habu1_s399842_g24568.t1 | gi|327284393|ref|XP_003226922.1| | PREDICTED: serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Anolis carolinensis] | 0.0 |
| habu1_s399842_g24568.t1 | gi|47497994|ref|NP_998835.1| | serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s399842_g24568.t1 | gi|530617873|ref|XP_005298664.1| | PREDICTED: serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 42.1 |
| Venom grand-1 | 25.2 |
| Pit, infrared sensing | 27.8 |
| Nose | 30.5 |
| Brain-1 | 49.1 |
| Eye | 35.8 |
| fetal fibroblast | 30.7 |
| venom gland-2 | 31.1 |
| Brain-2 | 35.6 |
| Spleen | 34.5 |
| Lung | 22.6 |
| Liver | 21.6 |
| Kidney | 16.4 |
| Pancreas | 20.4 |
| Small intestine | 46.0 |
| Large intestine | 30.5 |
| Stomach | 18.7 |
| heart | 19.8 |
| ovary | 46.2 |
| cheek muscle | 23.9 |
Transcript
| Transcript ID | habu1_s399842_g24568.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24568.t1 aaacgagcgagcgcgcgaggcttccttcctcaagcttcccgctcttgccccagaaagaagtcccggcggccgcttcctcc ggtatccctgcgcctcccccccccaggaggaagccgtgtcctccactaaattcggaatattttggttatgagtggtgaca tccacggacaatactacgacttactgcggctattcgaatacggaggtttcccaccggagagcaactatctctttcttggg gactacgttgaccgagggaagcagtctttagagacaatttgcctcttactggcctacaagataaaatatccagagaactt tttcctccttagaggcaaccatgagtgtgctagcattaatagaatttacggcttctatgatgaatgtaaaagaagataca acatcaagctgtggaaaacctttacagattgcttcaattgcttgccaattgcagccattgtggacgagaaaatattttgc tgccacggtggcttatcaccagatctccagtcaatggagcaaatccgacggattatgcggcccacagacgtgccagacca aggcctcctttgtgacctgctgtggtctgaccccgacaaggatgtgcttggatggggcgaaaatgaccgaggggtctctt tcacgtttggagctgaagtggtggccaagttccttcataaacacgatttggacctcatatgcagagctcaccaggtagtt gaagatggatacgagttctttgcaaaaagacagctggtaactctgttttctgcccccaattactgtggggagtttgacaa tgcaggtgctatgatgagtgtggatgagactctaatgtgctcctttcagatcttgaagcctgcagagaaaaagaagccca acgctagccgaccggtaacgccacccaggggaaggacgacttgaactagcagagtaaagctgtgatcagctggagtacag gattaaagacttttgatacttcccctatattcagtgtcgaagcgtgccactctgctcttttagccagttcagaaagttgt aacatgtgaagagacttgcctgagaattagaattactttaggttttgttttatttgcatcttgaagacttgctctctaca aagcttagaaaacaaccaactgcagcagtgaaccagtgttcacctgtttctatgactcacagtttcttgtggttcttttt ttgttttgtttttaaagaaaaacctgtaatctttttaaacagatgacagtgtacaatacaaatgtggtaaaatgcctatt aaatgagtaacttgttaaatcttct |
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Protein
| Protein ID | habu1_s399842_g24568.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24568.t1 MSGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDEC KRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGEND RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE KKKPNASRPVTPPRGRTT |
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