Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s399842_g24569
Locus habu1_scaffold399842 : 462018 ... 471500 : +
To GenomeBrowser habu1_scaffold399842:462018..471500
Genes list of scaffold habu1_scaffold399842

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s399842_g24569.t1 gi|602631788|ref|XP_007422791.1| PREDICTED: coiled-coil domain-containing protein 63 [Python bivittatus] 0.0
habu1_s399842_g24569.t1 gi|530618172|ref|XP_005298806.1| PREDICTED: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 63 [Chrysemys picta bellii] 0.0
habu1_s399842_g24569.t1 gi|591367172|ref|XP_007058438.1| PREDICTED: coiled-coil domain-containing protein 63 [Chelonia mydas] 0.0
habu1_s399842_g24569.t1 gi|558206134|ref|XP_006132647.1| PREDICTED: coiled-coil domain-containing protein 63 [Pelodiscus sinensis] 0.0
habu1_s399842_g24569.t1 gi|557259263|ref|XP_006015315.1| PREDICTED: coiled-coil domain-containing protein 63 [Alligator sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.1
Brain-1 0.2
Eye 0.1
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.4
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.5
cheek muscle 0.0

Transcript
Transcript IDhabu1_s399842_g24569.t1
Definition-
>habu1_s399842_g24569.t1
ggaaggagaggagcaaccaagcgcgggagccaagcctgccttaagcccctgcccagaaaaaaaaaaggagcgggcgggcg
cgcgggcgggcgggcagggtctccctggaacgcccccggcccagccaatgggacgcggccggctcacaaagagcccctgc
attcgccggatagtatctcatgccaggagcgaaaattcagacttcacggagaaggaaaaggagatgatggcagaagtcga
actgaggaagctgcagcaacagtttcggatcatggtggagaaccgcaagtcccttggtttcaaaacgcagcagcaattgt
tccaccaggaaagacacatccaggccttgaaacaagaatacgatgagattaatttgctgctgactctcaccaaatcaccc
cgcaacctttacatagatgaccggaacttcatggagctgaggttccttctgcagaccagagatgagtacgatgctctcat
cagagccaccaagaatttgatcgcagaacttgatgacaaggtagaagaggtggaaaaaaaaattaaaacccaaaaaaatc
taatagtcaagctgaggcaggagtatgatgggaagtggcttcagaagcaaatccacaagctggataaccagctcaatcat
gccacggtacattttgacacgatcttgaccagaaatgccatgctccgtgaagaaatagaaaccctgcagtgccagaaggc
gatctttgaaggcatctactcacggcttcacaagaagcttgagcagcaaaagaggaccatgaatacatccattgagcagt
ctacacaagcctacgagcagagggttgaagccctggcgaggatctctgccatgaatgaacggcgctccaaggatattgcc
cagttcaacattgagtttcgcgaactggagcgaatctataaccacgagaccaagctgaaagcatttatgctcatcaaact
ggtggaccgctctgaaattgaggaacaggccaaaaaggaagaagcgctcaaggcaaggaagcgggccaagtcgaaagggg
agagctttgagagctacgaggtggcctacatgcgactgctgaaactgacagaaaacgggaacattgggcagctggtggag
gacttcctggagaaggaagagaagaacttcgcctactttagctacgtcaccgaactgaacaatgacatggaaaggctgca
gaagaggattgaggtcgtccagaatgaaatcagccagctgaaatcccagcagaaggcagctgaagttgcagttcatggca
gtctgaaaagcatggagcaaaaactgcagaagaccactgaaaacgccaatctctacgcttacagtctgaaagagagcagc
aaaatcttggaccagctgaaatccgcagtggattttctgttcaagaagatcggctgcgatgccaccaagattacacagca
tctgggagagactggagagatcacggatcacaatttgatgcagtatttcagcatagtagaaaagaaaagcaacgaccttt
tgctgattgaatccttcctgcgctacaagcaagtcgaaggagagctggacaccgtcccactgatgaatccctttttgggt
gggagtgctctgctaaagaaaatggacgccattaaagtgactccaccttctctcagtgtggatccctttgcagacatgtc
agagcttatggaaccgctagaccacaaaaatctgcgtgccatggtcttggaaaaccaggagaaggaaaaagccacaagga
attccgtcgcagaaagattggagagtggcagagaaaaaaagaaagtgtcaccggtgtagaggctaagaaagaaatgggtg
gcaggacgagaaatcatcttttctcattggcttctttcatatacttagactcatgtatcttcttttatatatacatatat
acacacagtacaaaatgcgataccaagatggattttctttgcatagaataaaaaaattatgaacaaagaaagca

Protein
Protein IDhabu1_s399842_g24569.t1
Definition-
>habu1_s399842_g24569.t1
MGRGRLTKSPCIRRIVSHARSENSDFTEKEKEMMAEVELRKLQQQFRIMVENRKSLGFKTQQQLFHQERHIQALKQEYDE
INLLLTLTKSPRNLYIDDRNFMELRFLLQTRDEYDALIRATKNLIAELDDKVEEVEKKIKTQKNLIVKLRQEYDGKWLQK
QIHKLDNQLNHATVHFDTILTRNAMLREEIETLQCQKAIFEGIYSRLHKKLEQQKRTMNTSIEQSTQAYEQRVEALARIS
AMNERRSKDIAQFNIEFRELERIYNHETKLKAFMLIKLVDRSEIEEQAKKEEALKARKRAKSKGESFESYEVAYMRLLKL
TENGNIGQLVEDFLEKEEKNFAYFSYVTELNNDMERLQKRIEVVQNEISQLKSQQKAAEVAVHGSLKSMEQKLQKTTENA
NLYAYSLKESSKILDQLKSAVDFLFKKIGCDATKITQHLGETGEITDHNLMQYFSIVEKKSNDLLLIESFLRYKQVEGEL
DTVPLMNPFLGGSALLKKMDAIKVTPPSLSVDPFADMSELMEPLDHKNLRAMVLENQEKEKATRNSVAERLESGREKKKV
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