Gene
| Gene Model ID | habu1_s399842_g24572 |
|---|---|
| Locus | habu1_scaffold399842 : 551431 ... 556597 : - |
| To GenomeBrowser | habu1_scaffold399842:551431..556597 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24572.t2 | 1 | 1 | PH | 21 | 111 | 9.6e-20 | 70.7 | 5.5e-23 | 1.4e-19 | 70.2 |
| habu1_s399842_g24572.t2 | 1 | 1 | PH_11 | 21 | 64 | 1.6e-07 | 31.5 | 1.3e-08 | 3.2e-05 | 24.1 |
| habu1_s399842_g24572.t2 | 1 | 1 | PH_8 | 24 | 111 | 8.6e-06 | 25.7 | 6.2e-09 | 1.5e-05 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24572.t2 | gi|557259259|ref|XP_006015313.1| | PREDICTED: sesquipedalian-1 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.9 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 10.6 |
| Nose | 2.5 |
| Brain-1 | 2.0 |
| Eye | 3.0 |
| fetal fibroblast | 9.6 |
| venom gland-2 | 2.7 |
| Brain-2 | 1.6 |
| Spleen | 2.6 |
| Lung | 4.0 |
| Liver | 14.5 |
| Kidney | 16.5 |
| Pancreas | 10.5 |
| Small intestine | 3.8 |
| Large intestine | 5.6 |
| Stomach | 6.5 |
| heart | 4.0 |
| ovary | 17.7 |
| cheek muscle | 8.0 |
Transcript
| Transcript ID | habu1_s399842_g24572.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24572.t1 gataagcttctgagaaacagcagcctttgcagcgcagcaatctggtcaagagaagaagccaggatgggatgcccaccatg aagctgaacgagaggagcctctctttctacgccacctgtgcctctccggctgacaacgccggcttcctgcacaagaaggg cgagcgcaacacggcctaccaccggcgctggttcgtgctgagggggaacatgctcttctactttgaggaccgggagagcc gtgagccggtgggcgtcatcattctggagggctgcacggtagagctgtgcgaggccaccgaggagtttgccttcgccatc aagttcgactgccccaaatcccgcacctacgtgctggcggccgagagccaggccgccatggagctctgggtcaaggcgct ctccagggccagctttggctacctgcgcctggtggtgagggagctggagaagcagctggaagagatgcagaaggccatcc cgggcgcccagccggggccaagacggcggctgctttatcggaaaaacaaaacggctcccaatttggaactggctgttctg ccgcaggagaaaccggccctgcccgtttgcatccccgggaaagagaacggctgcgccttgtggaataactcggaagcctc ggccagcttgtctcctgcctgcagagagacagactcctccggcggggccaagagctacgatggggggctcaagccacccc cgttgccccctcggagacggtccctgccgagcggctcctgcgggaccagcggcccgaactcagacagccccgcgtctcca agtgcggtgtgtttttcccgactgcatgactggtatggtcaggagattgctgagttgcaaaaggcttggctggagggtca gaaggataaggacagcagcctttgaaccctccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn |
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| Transcript ID | habu1_s399842_g24572.t2 |
| Definition | - |
>habu1_s399842_g24572.t2 gataagcttctgagaaacagcagcctttgcagcgcagcaatctggtcaagagaagaagccaggatgggatgcccaccatg aagctgaacgagaggagcctctctttctacgccacctgtgcctctccggctgacaacgccggcttcctgcacaagaaggg cgagcgcaacacggcctaccaccggcgctggttcgtgctgagggggaacatgctcttctactttgaggaccgggagagcc gtgagccggtgggcgtcatcattctggagggctgcacggtagagctgtgcgaggccaccgaggagtttgccttcgccatc aagttcgactgccccaaatcccgcacctacgtgctggcggccgagagccaggccgccatggagctctgggtcaaggcgct ctccagggccagctttggctacctgcgcctggtgacggcggctgctttatcggaaaaacaaaacggctcccaatttggaa ctggctgttctgccgcaggagaaaccggccctgcccgtttgcatccccgggaaagagaacggctgcgccttgtggaataa ctcggaagcctcggccagcttgtctcctgcctgcagagagacagactcctccggcggggccaagagctacgatggggggc tcaagccacccccgttgccccctcggagacggtccctgccgagcggctcctgcgggaccagcggcccgaactcagacagc cccgcgtctccaagtgcggtgtgtttttcccgactgcatg |
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Protein
| Protein ID | habu1_s399842_g24572.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24572.t1 MKLNERSLSFYATCASPADNAGFLHKKGERNTAYHRRWFVLRGNMLFYFEDRESREPVGVIILEGCTVELCEATEEFAFA IKFDCPKSRTYVLAAESQAAMELWVKALSRASFGYLRLVVRELEKQLEEMQKAIPGAQPGPRRRLLYRKNKTAPNLELAV LPQEKPALPVCIPGKENGCALWNNSEASASLSPACRETDSSGGAKSYDGGLKPPPLPPRRRSLPSGSCGTSGPNSDSPAS PSAVCFSRLHDWYGQEIAELQKAWLEGQKDKDSSL |
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| Protein ID | habu1_s399842_g24572.t2 |
| Definition | - |
>habu1_s399842_g24572.t2 MKLNERSLSFYATCASPADNAGFLHKKGERNTAYHRRWFVLRGNMLFYFEDRESREPVGVIILEGCTVELCEATEEFAFA IKFDCPKSRTYVLAAESQAAMELWVKALSRASFGYLRLVTAAALSEKQNGSQFGTGCSAAGETGPARLHPRERERLRLVE |
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