Gene
| Gene Model ID | habu1_s399842_g24584 |
|---|---|
| Locus | habu1_scaffold399842 : 744006 ... 746757 : - |
| To GenomeBrowser | habu1_scaffold399842:744006..746757 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l6 | GO:0003735 GO:0005840 GO:0006412 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24584.t2 | 1 | 1 | Ribosomal_L6e_N | 6 | 67 | 1.7e-23 | 82.2 | 2.3e-27 | 1.7e-23 | 82.2 |
| habu1_s399842_g24584.t2 | 1 | 1 | Ribosomal_L6e | 152 | 259 | 5.40004e-41 | 139.2 | 7.00649e-45 | 5.40004e-41 | 139.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 527.2 |
| Venom grand-1 | 2942.8 |
| Pit, infrared sensing | 946.8 |
| Nose | 632.9 |
| Brain-1 | 143.5 |
| Eye | 610.7 |
| fetal fibroblast | 1037.8 |
| venom gland-2 | 2729.1 |
| Brain-2 | 142.0 |
| Spleen | 1056.6 |
| Lung | 962.6 |
| Liver | 2179.5 |
| Kidney | 1332.5 |
| Pancreas | 1754.6 |
| Small intestine | 1677.8 |
| Large intestine | 1043.5 |
| Stomach | 1316.7 |
| heart | 765.4 |
| ovary | 270.0 |
| cheek muscle | 1024.1 |
Transcript
| Transcript ID | habu1_s399842_g24584.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24584.t1 ttgcgactctcctggagggctcgtgcacggggcggcttctgaacacggggcggaaaagctggcctttctatggcaggcga gaagaaaaccaggagggtccggaaggtccatgccagccgcaatccggtgctggcccgagggatcgggagatattcccggt cagccatgtacgcccggaaggccatgtacaagcggaaatacaacgcgccagagacaaagatagaaaagaagaagaaagag aaggtggcagccactgttacaaagactgttgggggggataagaacggaggcacccgggtggtcaaacttcgcaagatgcc cagatactaccctacagaggacgttccccgtaagctcctaagccatggcaaaaagaattttgccctccacaagaggaggc tgcggacttcaattaccccaggaacggtgctggtccttctcactggccgccacaggggcaagcgtgtggttttcttgaag cagcttggaagtggactgttgcttgtaacagggcccttggctctcaaccgtgtccctctgcgcagagctcaccaaaagtt cgtcattgccacttcgacgaaggttgatatctctggggtcaaagttccaaagcatctcagtgacgtttatttcaagaaga agaagctgcgtaagcccaaacatcaagagggtgaaatttttgacactgaaaaagtgaaatacgagattgcagatcagcgt aaggcagaccagaagacggtggactcccagcttctgccaatcatcaagaaagtccctcagctccgaggctacctgcgctc aaccttttcactttccaacggagtttatcctcacaaattggtcttctaaatagtctgaaaatatcacagtaaaatctttt tggggaaaaattact |
|
| Transcript ID | habu1_s399842_g24584.t2 |
| Definition | - |
>habu1_s399842_g24584.t2 ccaggccccggatattgcctctttttccttctgcccaagatggcaggcgagaagaaaaccaggagggtccggaaggtcca tgccagccgcaatccggtgctggcccgagggatcgggagatattcccggtcagccatgtacgcccggaaggccatgtaca agcggaaatacaacgcgccagagacaaagatagaaaagaagaagaaagagaaggtggcagccactgttacaaagactgtt gggggggataagaacggaggcacccgggtggtcaaacttcgcaagatgcccagatactaccctacagaggacgttccccg taagctcctaagccatggcaaaaagaattttgccctccacaagaggaggctgcggacttcaattaccccaggaacggtgc tggtccttctcactggccgccacaggggcaagcgtgtggttttcttgaagcagcttggaagtggactgttgcttgtaaca gggcccttggctctcaaccgtgtccctctgcgcagagctcaccaaaagttcgtcattgccacttcgacgaaggttgatat ctctggggtcaaagttccaaagcatctcagtgacgtttatttcaagaagaagaagctgcgtaagcccaaacatcaagagg gtgaaatttttgacactgaaaaagtgaaatacgagattgcagatcagcgtaaggcagaccagaagacggtggactcccag cttctgccaatcatcaagaaagtccctcagctccgaggctacctgcgctcaaccttttcactttccaacggagtttatcc tcacaaattggtcttctaaatagtctgaaaatatcacagtaaaatctttttggggaaaaattact |
|
Protein
| Protein ID | habu1_s399842_g24584.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24584.t1 MAGEKKTRRVRKVHASRNPVLARGIGRYSRSAMYARKAMYKRKYNAPETKIEKKKKEKVAATVTKTVGGDKNGGTRVVKL RKMPRYYPTEDVPRKLLSHGKKNFALHKRRLRTSITPGTVLVLLTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRA HQKFVIATSTKVDISGVKVPKHLSDVYFKKKKLRKPKHQEGEIFDTEKVKYEIADQRKADQKTVDSQLLPIIKKVPQLRG YLRSTFSLSNGVYPHKLVF |
|
| Protein ID | habu1_s399842_g24584.t2 |
| Definition | - |
>habu1_s399842_g24584.t2 MAGEKKTRRVRKVHASRNPVLARGIGRYSRSAMYARKAMYKRKYNAPETKIEKKKKEKVAATVTKTVGGDKNGGTRVVKL RKMPRYYPTEDVPRKLLSHGKKNFALHKRRLRTSITPGTVLVLLTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRA HQKFVIATSTKVDISGVKVPKHLSDVYFKKKKLRKPKHQEGEIFDTEKVKYEIADQRKADQKTVDSQLLPIIKKVPQLRG YLRSTFSLSNGVYPHKLVF |
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