Gene
| Gene Model ID | habu1_s399842_g24589 |
|---|---|
| Locus | habu1_scaffold399842 : 856105 ... 867757 : - |
| To GenomeBrowser | habu1_scaffold399842:856105..867757 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| squamous cell carcinoma antigen recognized by t-cells partial | GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24589.t1 | 2 | 1 | RRM_1 | 691 | 759 | 1.5e-32 | 111.0 | 2.9e-16 | 8.7e-13 | 47.7 |
| habu1_s399842_g24589.t1 | 2 | 1 | RRM_6 | 691 | 754 | 2.6e-24 | 84.9 | 7.7e-13 | 2.3e-09 | 37.1 |
| habu1_s399842_g24589.t1 | 2 | 1 | RRM_5 | 707 | 763 | 8.0e-15 | 54.4 | 2.8e-09 | 8.2e-06 | 25.5 |
| habu1_s399842_g24589.t1 | 2 | 2 | RRM_1 | 788 | 856 | 1.5e-32 | 111.0 | 3.4e-20 | 1.0e-16 | 60.3 |
| habu1_s399842_g24589.t1 | 2 | 2 | RRM_6 | 788 | 854 | 2.6e-24 | 84.9 | 3.5e-15 | 1.0e-11 | 44.6 |
| habu1_s399842_g24589.t1 | 2 | 2 | RRM_5 | 806 | 861 | 8.0e-15 | 54.4 | 2.4e-09 | 7.2e-06 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24589.t1 | gi|602655666|ref|XP_007433577.1| | PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 [Python bivittatus] | 0.0 |
| habu1_s399842_g24589.t1 | gi|704294965|ref|XP_010160991.1| | PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3, partial [Caprimulgus carolinensis] | 0.0 |
| habu1_s399842_g24589.t1 | gi|700399007|ref|XP_009940280.1| | PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 [Opisthocomus hoazin] | 0.0 |
| habu1_s399842_g24589.t1 | gi|704513294|ref|XP_010081129.1| | PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 [Pterocles gutturalis] | 0.0 |
| habu1_s399842_g24589.t1 | gi|723558064|ref|XP_010300750.1| | PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3, partial [Balearica regulorum gibbericeps] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.7 |
| Venom grand-1 | 18.4 |
| Pit, infrared sensing | 13.8 |
| Nose | 11.7 |
| Brain-1 | 7.7 |
| Eye | 11.8 |
| fetal fibroblast | 16.9 |
| venom gland-2 | 21.0 |
| Brain-2 | 6.6 |
| Spleen | 12.6 |
| Lung | 16.8 |
| Liver | 16.8 |
| Kidney | 12.1 |
| Pancreas | 13.6 |
| Small intestine | 11.9 |
| Large intestine | 13.3 |
| Stomach | 11.2 |
| heart | 12.7 |
| ovary | 41.2 |
| cheek muscle | 14.8 |
Transcript
| Transcript ID | habu1_s399842_g24589.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24589.t1 ccttcgccttcgaggagggaggttaagccgctcgcggggtgccaggcagcggttcggacagcccgagagcttggcgcgcg aacgtgccgacgcagggggcctcgcggcgcagccagggcggcctctgggcgcgatgtcggactgggaggaggactgcgag gcggcggccaccgcgcggatggagagcacgaacgacgccgaggacccgctctccgactttgagctggacctggactcgga ctccatcaacctcgaggacgatcgcgattactatgaatattataacctaaaggagtacttgcccttcagcggctggggca cctgcgagattgggatcgacatcgttcgcctggagttgaagctggacaccaatccctatgattatgatgttcacctggaa ctgataaaactgctgcgtggggaacaatatatctccaggctccagttagcccgcaagcgcatgagtcagcgttttcctct cactgaagggctgtggctagagtggctgaaggatgagatatcatacgctaaagacgacgctaagaaggagaaggtttatg aactttttgagatagctgtgaaagactacatctgtcctgaaatctggctggagtacgcccagttctccattgggggcatg ggccgggaaggagggatagagagagttcgctcaatcatggaacgggcgctcactgctgtcggcctccatgtgaccaaagg agctgctatttgggaggcctatcgggagtttgaaaatgctttgctggcgaccatgaagctacccccggactgcgtcccaa cccctgagcagcagcgggccaccaaagcgcaactcgagaggatccatgcgctctatcgtcgggagctggcagttcccctc atagatatggaatcggcatttttggaatacgaaaactggaccgaggagccgatcccggggccagtgctgcaaaactacgt caaggctgtgcggcagttgcagaagtacaagccctacgaagaggccctgctgatagctgaaaccccaaagctggccgaat atcaagcttacattgactttgaagtgaagattggggatccagctcgcattcagctgatctatgagcgtgccttggttgag aactgccttgtgccagatctctgggttccttacgttcagtacttggacaggaagctgaaggtgaaggaggtggtgctttc cgcttgcaagcgagcggtcagaaattgcccgtggactgtcaagctgtggagccagtacctgctggccatggagaggcatg aggttgagcaccaggagatctcagaaaccttcgaagaggctttgaaagctggcttcattcaggccactgattacttggaa atttggcaggcgtacctggattaccttcggagaagagtagactttgcccgagtctcaagtcaggagctggaagagcttcg gtcagcctttgcccgtgccatcaaatatttaaaggaagatgttgaacggcagttcgctgagaagggagacccttcctgta ttcttttgcaggcctgggccaggatagaggcttgctactgcaacaacatggaaaaagcacgagaactctgggatattatc atggtcagcgggaactcgaaatatggcaacatgtggttggagtattacaacctggagcgggcacatggggaaccctttta ctgcaggaaagctttgtaccgggccgtgcagtgcacacaggactacccagagcatgtatgtgaggtgctgctcacgctgg agagaattgaaggcactttagaagactgggatctggcggttcagaagacagaaaaacggctggctctacttaaagagcag agggcaaaggcggcagaaaaggaggctgccctggccaagcaggaggaagagcaaaaagtggagcagcgcaagcaaactcg ggggaagaaaaaagccgtcaagcagtccaagaagcccaaagccggagtcaagcggaaggcagacaacgatggccaatggg aggaggaggaggaagccgaactagctatcaagaggccgaagggcggcagcggggatgtgccggtggaagtggaagacgaa gcgatggcgctccttgcagagaccttcgacttccagccagaggaagaaggagcagcagcagcagcttccaagtggaaaga cacccccaaaatgttccacgacagcaagaaggagggtttcaccgtctttgtcagcaacctcccctacagcatggccgagc cagaggcaaaactccgagacctttttgccagctgcggggaagtggccgaagtccgccccatcttcagcaacaaagggaca ttccgcggctactgttacgtggagttcaaggacaagaagtcagctctgcaggccttcggtctggaccggagagtggtgga aggcaggccgatgtttgtctctccgtacgtggacaaaagcaagaatccggatttcaaggtgttcaagtacagcaccgctc ttgagaagcacaagctgttcatctccggcctccccttttcgtgcacgaaagcggagctggaagaggtctgcaaagctcac gggaacgtgaaggatatccggctggtcaccaaccgatctggcaaacccaagggcttggcctacgtggagtttgagaccga aacacaggcctcccaggcggttctgaagatggatgggctgaccattatggaccacatcattaaagttgccatcagcaacc ctccggctcggagaattcctgaggggccggaagctgtggggaaaccgccccaaagtccagatgttcagccggctccgggc gcccgtcgcaagggaagaacccagctgtcgatggtccctcgtgccttgcagcgtcccagcaacccagcagccaaggcggc gaacggcacggtggaaaacccgcccgcgacgccctccccgtctgcaggaatgcccaagatgatgtccaacgcggactttg ccaagctgctgcagaaaaagtgaactgctgcccttgaccagcaaagctgggggctgccaaggccccccggaagtcatcgg ctggtctttccccgaagttacgctgcggctgatcgtggctcccctccggttccagtttggactttatgtccaccgaaagc ccgaacagggaggggtcgattccccacccccttgaatcatcagagggcaaagttattgagtttggggtgcgtgcgaggaa tttgttaaaaatggctttaaatgctccctcatattgggggtttcatgtgacgagagcttacttcgaagctgaacacagta tgttttaatagttgggtttttttcagctgttctccaaatgaagagtttaatgtgaattgagtctcgatctagtttataca aatcccaccgcaagcactgagctaagctgggcagctttgtgacgctgcctccgtgcgtgcaggagcctcgaaccagtccg gctccttttcatgtacaaaatgagtataaatagcagatgcgaggaacttcaccataatggcctattttagtattggggta gaagggaggtgtttctactgacccgtttgctcagagtggagtcttgtctttttatacacagacccaacctgcacacctct ctttgcggatgtgaaaagcacatgctggtcattttcgagctttcattgacccagcactagagggacagacagaccctctg cgcagcttcggtgtttccctttgccaggttcttgtaatggcctctagccagacccgtttgggtccttgagaggtttggct tgcaacatttttttttaaaaaaaagttgtatacaatgtgaaatgtgagcctgcggcgtttccccctttgggttcattaaa gttgttcttgcaagttgagtga |
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Protein
| Protein ID | habu1_s399842_g24589.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24589.t1 MSDWEEDCEAAATARMESTNDAEDPLSDFELDLDSDSINLEDDRDYYEYYNLKEYLPFSGWGTCEIGIDIVRLELKLDTN PYDYDVHLELIKLLRGEQYISRLQLARKRMSQRFPLTEGLWLEWLKDEISYAKDDAKKEKVYELFEIAVKDYICPEIWLE YAQFSIGGMGREGGIERVRSIMERALTAVGLHVTKGAAIWEAYREFENALLATMKLPPDCVPTPEQQRATKAQLERIHAL YRRELAVPLIDMESAFLEYENWTEEPIPGPVLQNYVKAVRQLQKYKPYEEALLIAETPKLAEYQAYIDFEVKIGDPARIQ LIYERALVENCLVPDLWVPYVQYLDRKLKVKEVVLSACKRAVRNCPWTVKLWSQYLLAMERHEVEHQEISETFEEALKAG FIQATDYLEIWQAYLDYLRRRVDFARVSSQELEELRSAFARAIKYLKEDVERQFAEKGDPSCILLQAWARIEACYCNNME KARELWDIIMVSGNSKYGNMWLEYYNLERAHGEPFYCRKALYRAVQCTQDYPEHVCEVLLTLERIEGTLEDWDLAVQKTE KRLALLKEQRAKAAEKEAALAKQEEEQKVEQRKQTRGKKKAVKQSKKPKAGVKRKADNDGQWEEEEEAELAIKRPKGGSG DVPVEVEDEAMALLAETFDFQPEEEGAAAAASKWKDTPKMFHDSKKEGFTVFVSNLPYSMAEPEAKLRDLFASCGEVAEV RPIFSNKGTFRGYCYVEFKDKKSALQAFGLDRRVVEGRPMFVSPYVDKSKNPDFKVFKYSTALEKHKLFISGLPFSCTKA ELEEVCKAHGNVKDIRLVTNRSGKPKGLAYVEFETETQASQAVLKMDGLTIMDHIIKVAISNPPARRIPEGPEAVGKPPQ SPDVQPAPGARRKGRTQLSMVPRALQRPSNPAAKAANGTVENPPATPSPSAGMPKMMSNADFAKLLQKK |
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