Gene
| Gene Model ID | habu1_s399842_g24593 |
|---|---|
| Locus | habu1_scaffold399842 : 894562 ... 919470 : - |
| To GenomeBrowser | habu1_scaffold399842:894562..919470 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24593.t1 | 1 | 1 | DUF1899 | 370 | 434 | 2.8e-34 | 116.5 | 1.9e-37 | 5.7e-34 | 115.5 |
| habu1_s399842_g24593.t1 | 3 | 1 | WD40 | 442 | 475 | 2.3e-24 | 84.3 | 8.5e-13 | 2.5e-09 | 36.6 |
| habu1_s399842_g24593.t1 | 3 | 2 | WD40 | 488 | 526 | 2.3e-24 | 84.3 | 5.7e-10 | 1.7e-06 | 27.6 |
| habu1_s399842_g24593.t1 | 3 | 3 | WD40 | 540 | 567 | 2.3e-24 | 84.3 | 3.6e-07 | 0.0011 | 18.8 |
| habu1_s399842_g24593.t1 | 1 | 1 | DUF1900 | 624 | 757 | 0.0 | 190.8 | 0.0 | 0.0 | 189.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24593.t1 | gi|602663739|ref|XP_007437495.1| | PREDICTED: coronin-1C [Python bivittatus] | 0.0 |
| habu1_s399842_g24593.t1 | gi|641797080|ref|XP_005298624.2| | PREDICTED: coronin-1C isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s399842_g24593.t1 | gi|697816984|ref|XP_009634292.1| | PREDICTED: coronin-1C isoform X1 [Egretta garzetta] | 0.0 |
| habu1_s399842_g24593.t1 | gi|694832599|ref|XP_009470735.1| | PREDICTED: coronin-1C isoform X2 [Nipponia nippon] | 0.0 |
| habu1_s399842_g24593.t1 | gi|699642828|ref|XP_009878614.1| | PREDICTED: coronin-1C [Charadrius vociferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.0 |
| Venom grand-1 | 5.6 |
| Pit, infrared sensing | 12.2 |
| Nose | 5.7 |
| Brain-1 | 9.5 |
| Eye | 4.8 |
| fetal fibroblast | 49.5 |
| venom gland-2 | 3.3 |
| Brain-2 | 7.4 |
| Spleen | 11.0 |
| Lung | 12.3 |
| Liver | 5.9 |
| Kidney | 1.3 |
| Pancreas | 2.9 |
| Small intestine | 12.5 |
| Large intestine | 22.8 |
| Stomach | 16.3 |
| heart | 9.5 |
| ovary | 12.3 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s399842_g24593.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24593.t1 gtgttccagcttttggccagctgtgctttttttgtggaaggcgagcacgtcagatgtttatatcctgttatgaaggttgc tatgaatgcctggcgtgtcataaccatcctcttaacaattacatatcccagcaccgcagatagaatcagcatcccctccg cttgctggccaaaactgcctcttttccccgagcgtcacggatgggacaggatggggcaagaagaccttcccggcgaagaa agagaaaacagcagagagctttggaatctgcagctcgtccttccagcacggacgctctgcagccgagacgtcggagctgg ctgcttctgttcaggaatttggcctgggggttccggcccctgctgagcatggaagctgcagaaaggccccacttgctgga gagcagcaagaggacacaaagcaagcagccccctcacccccgaaagacctccgagatgccacacaacgcttgggcttcaa tggcggagcaggaggctggagacagccacccggcaaggggcaccacgggctgcattcaggtgtccacaagagaaatacaa ttgaaccgaagcccggaggagggaggagcaggtgcgcacctgtgcggaaagggcccagaggggccgggtgcgatgcaggt gttcccagagcagtggttggaagaaggaggcaggaaggtgaatgctcttttgtactggctggaggaagccgaattcagca tcgtcaccacccaggggggattccacccctctgactctccagcctctgagaggaaaagggaaatgacagatcgcagttgg cccttggttcatatatataactttggccgccagcaaagctgggagagagaagctgcaggtgggagcagagagatgaccga tgctccccaggggaccctgcggaggcagatatcacggtcggattcggagggcagcggggcagaaaacagacaagtcaaca ggctcatgctgaactcccctggtgaggaaaacaaggccgggatccttagttggctggatttttctgcggggaaggagaat gaagagagggagaattccccggtgcgaaggaatcaagaaccggaagaagaaactcccagcagctcaggagtggtcattga agaaacggcttccggcggagaaacagcctggggagacgagcctgttgtgccactgcagcaaagaaagggaacaaaacaac aagaggaggaaaaatcgctgaaagtcgcagatgtgaagaagacgtttgaaaagcggaagccggcagccgagaaggctgca tcacctgctagaaaagaaacaatgagacgagtggtgcgacagagcaagttccggcacgtgtttggccaggcggtgaaaaa tgaccagagttatgacgacatccgggtgtcccgtgttacgtgggacagctccttctgcgcagtcaaccccaaattcgtgg ccatcatcatcgaagccagcgggggaggggcgttcctggttctgcctttacacaagacaggtagaatcgacaaatcgtac cccaccgtttgtggccacaccgggccggtgctggacatcgactggtgtccccacaacgaccaagtgatcgccagcggctc cgaggactgcacggtgatggtctggcagatcccggagaacggcctcacgctctccctgacggagcctgtcgtcatcctgg aaggccactccaagagggtgggcatcgtggcctggcaccccaccgcccgcaacgtgctgctcagcgcaggctgtgacaat gccatcctcatctggaacgtgggcacaggggagcccctgatcaacctggacgacatgcaccaagacatgatctacaatgt aagctggaaccgcaacggcagcctgatctgcacggcctccaaagacaagaaggtccgcgtgatcaacccccggaagcagg agatcattgcggagaaagagaaggcgcacgaaggcgcccggccgatgcgagccatcttcctctccgacgggaacgtgttc accacggggttcagccgcatgagcgaaaggcagctggccctctggaacccgaaaaacatggacgaccccgtagccctcca tgaaatggacaccagcaacggggtcctgctgcccttctacgaccccgacacaaacatcctctacttatgcgggaagggcg acagcagcatccgctacttcgaggtcacggacgaggcccccttcgtgcactacctcaacaccttcagcagcaaggagccc cagagggggatgggcttcatgcccaagaggggcttggatgtcaacaagtgtgagatcgccaggttcttcaaacttcacga gaggaagtgcgaaccgattatcatgactgtccctcggaagtctgacctctttcaggatgacctctatcctgacacagctg ggcccgaagccgccctggaagccgaggagtggtttgaggggaagaacgccgaccccctcctcatctccttgaaacacggc tacatcccagggaaaaaccgggacctcaaggtggtcaagaagaacatcctggacaacaagccggctgccaacaagaagag tgatctcatcagcaccccaaagaaagcgatggacacctcaaaccctcaaaacgaagccaaattggaagaaatcttgaagg agctccggtcgctaaaagacacaatcgcgcatcaggacgagcgcatttccaaattagaacagcaggtggcgaagatggcc gtctgagagccagcggtggaggggggtcttcggcagggggaggaggaagcaggattcggactgtgagccacctgcagggc tgcggnnnnnnnnnnnnnnnnattgctgatttctgggtccatgtttcctgcagatgtttgttctatttatcatccaggtg ttacaaggttataaaaaaaatatgatgaatttgggac |
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Protein
| Protein ID | habu1_s399842_g24593.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24593.t1 MGQDGARRPSRRRKRKQQRALESAARPSSTDALQPRRRSWLLLFRNLAWGFRPLLSMEAAERPHLLESSKRTQSKQPPHP RKTSEMPHNAWASMAEQEAGDSHPARGTTGCIQVSTREIQLNRSPEEGGAGAHLCGKGPEGPGAMQVFPEQWLEEGGRKV NALLYWLEEAEFSIVTTQGGFHPSDSPASERKREMTDRSWPLVHIYNFGRQQSWEREAAGGSREMTDAPQGTLRRQISRS DSEGSGAENRQVNRLMLNSPGEENKAGILSWLDFSAGKENEERENSPVRRNQEPEEETPSSSGVVIEETASGGETAWGDE PVVPLQQRKGTKQQEEEKSLKVADVKKTFEKRKPAAEKAASPARKETMRRVVRQSKFRHVFGQAVKNDQSYDDIRVSRVT WDSSFCAVNPKFVAIIIEASGGGAFLVLPLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPEN GLTLSLTEPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAILIWNVGTGEPLINLDDMHQDMIYNVSWNRNGSLICTAS KDKKVRVINPRKQEIIAEKEKAHEGARPMRAIFLSDGNVFTTGFSRMSERQLALWNPKNMDDPVALHEMDTSNGVLLPFY DPDTNILYLCGKGDSSIRYFEVTDEAPFVHYLNTFSSKEPQRGMGFMPKRGLDVNKCEIARFFKLHERKCEPIIMTVPRK SDLFQDDLYPDTAGPEAALEAEEWFEGKNADPLLISLKHGYIPGKNRDLKVVKKNILDNKPAANKKSDLISTPKKAMDTS NPQNEAKLEEILKELRSLKDTIAHQDERISKLEQQVAKMAV |
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