Gene
| Gene Model ID | habu1_s399842_g24595 |
|---|---|
| Locus | habu1_scaffold399842 : 937741 ... 943516 : + |
| To GenomeBrowser | habu1_scaffold399842:937741..943516 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24595.t1 | 1 | 1 | DAO | 3 | 328 | 3.1e-27 | 95.4 | 7.3e-31 | 3.6e-27 | 95.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24595.t1 | gi|557259047|ref|XP_006015214.1| | PREDICTED: D-amino-acid oxidase [Alligator sinensis] | 0.0 |
| habu1_s399842_g24595.t1 | gi|602663741|ref|XP_007437496.1| | PREDICTED: D-amino-acid oxidase isoform X1 [Python bivittatus] | 0.0 |
| habu1_s399842_g24595.t1 | gi|530617785|ref|XP_005298620.1| | PREDICTED: D-amino-acid oxidase [Chrysemys picta bellii] | 0.0 |
| habu1_s399842_g24595.t1 | gi|564250343|ref|XP_006264239.1| | PREDICTED: D-amino-acid oxidase [Alligator mississippiensis] | 0.0 |
| habu1_s399842_g24595.t1 | gi|591367080|ref|XP_007058392.1| | PREDICTED: D-amino-acid oxidase [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.9 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 5.0 |
| Nose | 3.6 |
| Brain-1 | 5.1 |
| Eye | 7.8 |
| fetal fibroblast | 5.4 |
| venom gland-2 | 1.1 |
| Brain-2 | 6.7 |
| Spleen | 16.8 |
| Lung | 10.8 |
| Liver | 138.7 |
| Kidney | 269.6 |
| Pancreas | 44.5 |
| Small intestine | 172.9 |
| Large intestine | 55.2 |
| Stomach | 9.6 |
| heart | 5.5 |
| ovary | 1.1 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s399842_g24595.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24595.t1 ggtgctgatgcctccctcaactctgggctgcgagacggggagtctgtgcgattctcccctgtgggaattgtccccacgtc tctgcaggcgctcttgcaaaaaggagggagaggatggcataagcagcccccatctgcagaaggagggcacacggcggagt aaggagaggaactagtaacagtacccataatccacagtatggtggcaagacatctggattgccattgaagcctctattaa tcgggagaaccttgtgggaattttcccagatgtgaacgagttgtaaagcgaggtgctctggacaggacagaaggacgtta actgagctcggaagatttcttctcgtctcagctcaaaggatccagagattgtcacatcacaccagcctggacggtgccat gctagaatagcttcttggcacagggaaagcctaagctccaccttgtggcctcgttaccctgtcggagggaactttgacca tccacaagttcccagctttcttcctgcacggagcggcacccgctgggcaaacagccgtggtagaagaccttcctgggcct gtggactgtcccggtgagaagactctgccatgcgtgtcgccgtgatcggagctggggtgataggactgtccacagccctt tgcatccatgaccaatggcgttctgctgaccggccgctgcaggtggagatctacgcggatgaattcagccccggcacaac cagcgatggggccgccggcctttggcagccctacctgtatgacaaaggaaacactcaagagacgatctggaacaaagaga ctttcgattatctgctccaacatgttaattcaccagaagccaaggagatggggctctttctgctctctggatacaacctc ttccgacaaccggttgccgagccatcatggaaacatattgtcttgggatttaggaaattgtcccagaaggagctggagct gttccccggctacagctacggctggttcaacacagccctgatcttggaaggcaaaagctatctcgcctggcttacaaacc agttgacctcaaggagggtccagttcttccatcggaaaatcaggtccttccaggagctggcagctgaaggagtggacgtg gttgtcaactgtaccgggatccgtgccggagagctacagagtgaccctgagctgcgtccaggccgaggacaggtcatcaa ggttgatgccccctgggtgaagcacttcatcctcacccatgacctcgaagctggcatctacaaggagccctacatcatcc ctgggagccgtgtagtgaccttggggggcatatttcagctggggaactggagtacaaagaacaatcccgaggaccataga aacatctgggaaggatgctgcaagttgttgcccagcctccagaaagccaagatagtcgaagaatggagtggtttacgccc atcgcgcactaaagtccggctggaacacgagaccattcgccatgggacgctccgatgcgaggtgattcacaattacggtc acggaggttttgggctcaccattcactgggggtgtgccatggaagcagccaaactctttgggaagatcctagaaggccag aagttgaccaagccacctcgggccaacctttgaacaagggcaaaggtgtaggacacccgtctgtgttgatctatttttct tctttccatctcacaagggggaactaatcttgccgaatttgggagtccagttccttaagactatttataactgaggccct cactttgaatgtctatacagggtaaataagactttactctggggttagtaagcgtcccaaggtttgtggagctgttccat ttttcttttatgttgatttggattttgggtacaaaaaacaccctcgtggatgttgggttttattcatagggaggagatga acaaatgtgttcaagtagagggcaaacaaccatctgaaatagttatttttggattttttctcaaggcaggaggctgcccc cccccttccactctgtgggttcattcaactttctcttacgctttttcttctcaaataacaactacatctgcttcccaatc catgttctctttgcttctggtttctagtggagttgtcctctattaaaacttacaaaatacttttaaagc |
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Protein
| Protein ID | habu1_s399842_g24595.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24595.t1 MRVAVIGAGVIGLSTALCIHDQWRSADRPLQVEIYADEFSPGTTSDGAAGLWQPYLYDKGNTQETIWNKETFDYLLQHVN SPEAKEMGLFLLSGYNLFRQPVAEPSWKHIVLGFRKLSQKELELFPGYSYGWFNTALILEGKSYLAWLTNQLTSRRVQFF HRKIRSFQELAAEGVDVVVNCTGIRAGELQSDPELRPGRGQVIKVDAPWVKHFILTHDLEAGIYKEPYIIPGSRVVTLGG IFQLGNWSTKNNPEDHRNIWEGCCKLLPSLQKAKIVEEWSGLRPSRTKVRLEHETIRHGTLRCEVIHNYGHGGFGLTIHW GCAMEAAKLFGKILEGQKLTKPPRANL |
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