Gene
| Gene Model ID | habu1_s399842_g24600 |
|---|---|
| Locus | habu1_scaffold399842 : 964711 ... 967823 : + |
| To GenomeBrowser | habu1_scaffold399842:964711..967823 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uracil-dna partial | GO:0004844 GO:0005634 GO:0005739 GO:0006284 GO:0016446 GO:0016447 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24600.t1 | 1 | 1 | UDG | 129 | 286 | 5.0e-29 | 100.7 | 5.0e-33 | 7.5e-29 | 100.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24600.t1 | gi|602672928|ref|XP_007441965.1| | PREDICTED: uracil-DNA glycosylase isoform X1 [Python bivittatus] | 0.0 |
| habu1_s399842_g24600.t1 | gi|602672930|ref|XP_007441966.1| | PREDICTED: uracil-DNA glycosylase isoform X2 [Python bivittatus] | 0.0 |
| habu1_s399842_g24600.t1 | gi|558178886|ref|XP_006126804.1| | PREDICTED: uracil-DNA glycosylase, partial [Pelodiscus sinensis] | 0.0 |
| habu1_s399842_g24600.t1 | gi|641797091|ref|XP_008161857.1| | PREDICTED: uracil-DNA glycosylase [Chrysemys picta bellii] | 0.0 |
| habu1_s399842_g24600.t1 | gi|696979775|ref|XP_009558788.1| | PREDICTED: uracil-DNA glycosylase [Cuculus canorus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.6 |
| Venom grand-1 | 2.1 |
| Pit, infrared sensing | 4.7 |
| Nose | 3.4 |
| Brain-1 | 0.6 |
| Eye | 2.0 |
| fetal fibroblast | 8.4 |
| venom gland-2 | 2.6 |
| Brain-2 | 0.9 |
| Spleen | 4.0 |
| Lung | 2.1 |
| Liver | 4.8 |
| Kidney | 5.0 |
| Pancreas | 7.9 |
| Small intestine | 2.3 |
| Large intestine | 3.5 |
| Stomach | 3.1 |
| heart | 1.2 |
| ovary | 45.2 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s399842_g24600.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24600.t1 agaggcggctgcggttgcctcgcctccatggcggcggccttgggaatgtggtcgtgtccccgctgcctcttacctgcttc cccgcccccgctcctgacccgttccttttccctcttgcaggccgccaaaagatcgaagactgatggctgctcgccgcaat ctcccccgcttagcccggaactggtggagcgcatccggaaaaacaaagaggtggcgttgcagaagctcgcagcccgcacc gccagctacattcccgcggagctggggcagagctggagggtctccctggccaaagagttctccaaaccgtattttgctca gctgatggcatttgttgctgaagaacgcaagcgctgtacagtttatccaccccagcatcaggtcttcacttggacccagc tgtgtgacatccatgatgtgaaagttgtcattttgggccaagatccatatcacgggcccaatcaagctcacgggctctgc ttcagcgtccagagaccggttccccctccacccagcctggaaaatatttacaaagagcttgctgtggatatagaaggctt ttctcatcctggccatggagatttgactggatgggctaaacaaggtgtgctgctgcttaatgctgtcctcaccgtccgag ctcatcaagccaattcccaccgggagaggggctgggagcagctcacagacgccgtggtcgcctggctgaacgagaacctg gacagcctggttttcatgctgtggggagcttatgctcagaagaagggcagctccattgacaggaaacggcatcacgtcct gcagacagcacatccctcgcccctctcggtgcacagggggttctttggctgtaggcatttctccaaaacgaatgaattcc tgaagaaatccgggaagcagctgatcgactggaaggccctgtaggatcccacaactccctggagaccatgagaccagccc tttttgcccccatcaggctggagaggctttgcagaaatattcttggaagctgatctaaactattcttttcacttttaatt caggggcaacctgagtcggggtgcttactccaagaatatatatctatatatatttttattttggagcgaagggagattaa caaaggagccctgccctgtttctctttgaattctttatcactatcaagaacgtcgtgccaatctgttctttgcaataat |
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Protein
| Protein ID | habu1_s399842_g24600.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24600.t1 MAAALGMWSCPRCLLPASPPPLLTRSFSLLQAAKRSKTDGCSPQSPPLSPELVERIRKNKEVALQKLAARTASYIPAELG QSWRVSLAKEFSKPYFAQLMAFVAEERKRCTVYPPQHQVFTWTQLCDIHDVKVVILGQDPYHGPNQAHGLCFSVQRPVPP PPSLENIYKELAVDIEGFSHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHRERGWEQLTDAVVAWLNENLDSLVFMLWG AYAQKKGSSIDRKRHHVLQTAHPSPLSVHRGFFGCRHFSKTNEFLKKSGKQLIDWKAL |
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