Gene
| Gene Model ID | habu1_s399842_g24602 |
|---|---|
| Locus | habu1_scaffold399842 : 997228 ... 1004120 : - |
| To GenomeBrowser | habu1_scaffold399842:997228..1004120 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| forkhead box protein n4 | GO:0003407 GO:0006355 GO:0043565 GO:0048663 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24602.t1 | 1 | 1 | Fork_head | 128 | 219 | 8.7e-31 | 105.8 | 1.0e-34 | 1.5e-30 | 105.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24602.t1 | gi|602672932|ref|XP_007441967.1| | PREDICTED: forkhead box protein N4, partial [Python bivittatus] | 0.0 |
| habu1_s399842_g24602.t1 | gi|326929730|ref|XP_003211009.1| | PREDICTED: forkhead box protein N4 [Meleagris gallopavo] | 0.0 |
| habu1_s399842_g24602.t1 | gi|694637608|ref|XP_009477385.1| | PREDICTED: forkhead box protein N4 [Pelecanus crispus] | 0.0 |
| habu1_s399842_g24602.t1 | gi|696979706|ref|XP_009558764.1| | PREDICTED: forkhead box protein N4 [Cuculus canorus] | 0.0 |
| habu1_s399842_g24602.t1 | gi|134085836|ref|NP_001076828.1| | forkhead box protein N4 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.2 |
| Brain-1 | 0.1 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s399842_g24602.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24602.t1 ccctcggctgcagcagatgaccagcggaaggatggattttggcatcacttcccagaatgtagtcctgcagcagacaggtg ccatgcacacctcgggggccccaagagcgacgcctcacgtacaagccagcgtgtctccaaacattctaggacttaacacc gtctcgccccacgaaagcaacataagtccgtatgtggtgggggggcagtcatcccccagccttcagccgcagctggcccc gctcttccccactccctcctgccacacccagcagatcttcaccatcacccacagcacacagcagtgcaatccagtgacca tctacagcacctcttacgggacccccgcccactttccccagccccgcctggctcctcacgcagcccaggagctacacagc aagcaataccccaagcccatctattcctacagctgcctgatcgccatggccctgaagaacagcaagacgggcagcctccc tgtgagcgagatctacggcttcatgaaggagcacttcccctatttcaagacggcccccgacggctggaagaactccgtgc ggcacaacctgtccctgaacaagtgcttcgagaaagtcgagaacaaggcgagcagctcctcacgcaagggctgcctctgg gccctcaatcccgccaagatagacaagatggaggaggagatgcagaagtggaagaggaaagacccggccgccattcgcag gagcatggcgaacccagaggaactggacaagttgatcactgaccgccctgctggctgcaggaggcccggcaagctggcgg aggccgaagcgtccatgcgcagccacggggcagcggccgctcagggccacctgctgcaggtgcagccccagccgatgagg acgccatccttgcagtccgtccggcttcaccggcagatccagccccaggcgtgcttggccccagactcgccggcccctgc tcagacacccccgcttcacgccctgcccggcgtccaccacagccccctccctcaccacctggtgagccgcagccccgatt ttctcaacatgatgactgacctgagcactgaggtggacgccctcgatcccagcattatggacttcgcactccaagggaac ctctgggaggagaaggaagaggacggcttcaacctggaatccctgggtgccttcagcaactcccccctggcgctctccga ctgcgacctggcgcctgccagcctgccccctgcgcccagtgccagccaccactcctttgcagacttgcaggtgacgggcc tctacacaacctacgccacgctggatgccgtctcccccacacagtaccggggccctcaagggaacaaacccatcgctctg ctctgaaagccccattacacccggactgggcaaccttgtcgtgctcgcagacaccccccctcccaagaacctgtttcaca caaatattttttaaaaaagcaaatataagactacttacagacattgtaatgcctgatgaggctagaaaagcaaaacgcag acggaagtggaaatggtctacgaaaaggtttccccttgaaaatgtactttcagttctgatgatttgatgtgctgatcatc ccataatttactactgtcagctttgtagggaaacaaacgacaataaaaatgtgttactgacagagacac |
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Protein
| Protein ID | habu1_s399842_g24602.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24602.t1 MDFGITSQNVVLQQTGAMHTSGAPRATPHVQASVSPNILGLNTVSPHESNISPYVVGGQSSPSLQPQLAPLFPTPSCHTQ QIFTITHSTQQCNPVTIYSTSYGTPAHFPQPRLAPHAAQELHSKQYPKPIYSYSCLIAMALKNSKTGSLPVSEIYGFMKE HFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKASSSSRKGCLWALNPAKIDKMEEEMQKWKRKDPAAIRRSMANPEELDK LITDRPAGCRRPGKLAEAEASMRSHGAAAAQGHLLQVQPQPMRTPSLQSVRLHRQIQPQACLAPDSPAPAQTPPLHALPG VHHSPLPHHLVSRSPDFLNMMTDLSTEVDALDPSIMDFALQGNLWEEKEEDGFNLESLGAFSNSPLALSDCDLAPASLPP APSASHHSFADLQVTGLYTTYATLDAVSPTQYRGPQGNKPIALL |
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