Gene
| Gene Model ID | habu1_s399842_g24606 |
|---|---|
| Locus | habu1_scaffold399842 : 1045631 ... 1054283 : + |
| To GenomeBrowser | habu1_scaffold399842:1045631..1054283 |
| Genes list of scaffold | habu1_scaffold399842 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24606.t1 | 1 | 1 | HECT | 596 | 927 | 0.0 | 307.3 | 0.0 | 0.0 | 306.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s399842_g24606.t1 | gi|562887806|ref|XP_006171285.1| | PREDICTED: ubiquitin-protein ligase E3B isoform X1 [Tupaia chinensis] | 0.0 |
| habu1_s399842_g24606.t1 | gi|533165591|ref|XP_005396511.1| | PREDICTED: ubiquitin-protein ligase E3B isoform X2 [Chinchilla lanigera] | 0.0 |
| habu1_s399842_g24606.t1 | gi|533165589|ref|XP_005396510.1| | PREDICTED: ubiquitin-protein ligase E3B isoform X1 [Chinchilla lanigera] | 0.0 |
| habu1_s399842_g24606.t1 | gi|21707606|gb|AAH34059.1| | Ube3b protein [Mus musculus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.3 |
| Venom grand-1 | 6.7 |
| Pit, infrared sensing | 5.8 |
| Nose | 4.9 |
| Brain-1 | 3.6 |
| Eye | 5.2 |
| fetal fibroblast | 7.4 |
| venom gland-2 | 6.5 |
| Brain-2 | 2.8 |
| Spleen | 4.9 |
| Lung | 5.8 |
| Liver | 9.6 |
| Kidney | 8.4 |
| Pancreas | 7.9 |
| Small intestine | 7.4 |
| Large intestine | 5.3 |
| Stomach | 5.5 |
| heart | 6.0 |
| ovary | 7.2 |
| cheek muscle | 11.6 |
Transcript
| Transcript ID | habu1_s399842_g24606.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24606.t1 gtgaaccatgtttgtctacgggtgacctccgggctcttctgcaaaacacacccgcctgggaggccaaaatgttcagcgca acccaatcgtccaaggccgagttcctggacaaggcccggcaggcccgggaggagcgccgggagcagaaggaacgtgagca ggctgcggtgcggatccaagccctcgtccgaaggtttctgtgccgctgtcggctgcagcggaaaatcaggagcgaagtgg ataatttctttcacaccagcggtcctgccaagaagacggctctttcgctgtttaaaatctcccgaaagctgctctttatt ttcaagctccctcaggacaaagagagatttgaaaagctgtgccgctgcatccttagcagcatggaggcagaaaatgatcc taaagtgtggtacgtatcccttgcactctccaaggagctgactctcctatggatccagcaagtgaaggatgtgctgtgga tttgctgtgaatttctgaagctgctcaagccagacatcttgcaagattcaaaactggtaaatttgcacctcacgatgctg gtgacttttacggacacctctacctggaaaatcctgcagggaaaaggagaagccctgcgccacgccatgaatcacatctg tgcaaatatcatgggacatctcaaccagaaagggttttactctgtgctccagcgcctggcagtgatggaatcccaggatc tcctgcgcaggttcctgttgttcttgagccgggaagagcaatgcagagacgtctgtgtgtgtctggaaggaagccacaca ctctgccttctgggcaacctcgtctacttgggctcgctgaatgagaaggtgctgcaggaggagaccccccactttgtgag cgtcctgacgcagacgctctgctactgccagaagtacgtctcgcagaagaagtccaacctcacccactggcacccggtcc ttggctggttctcccagacggtggattatggcctgaacgagtcgatgcctttgctcaccaagcagcttcagcacctctgg ggggcccacatgatccggatcctcttcagcgacgtgctcagcaaaaagctcctggagagccaagaagctgctcgccagcc cccgccagcctcctccccacaaagcagcctgcccgtgaagagtctcttcagacgcgccttccagaaatcgacctccgtcc gcaacatcctgaagcccatcggcggcaaaagggtggattcggcggaggtgcagaaggtgtgcagcatctgcgtcctgtac cagatggccctgaccaccctgacgcagatccggctgcagatcctcacaggcctcacctacctggacgacctcctgcccaa gctctgggccctcatctgtgagctgggcccccaggggggcctgaaggtcttcctggagtgcttgaacaaccacacggagg agtccaagcggctgctggccatgctgacgctcttctgcgactgctcgcgccatctgatcacggacctcaagcccaacttg ctgttccaggagctcgacaaagatcggaagcgagcccagctggtcctgcagtacatccctcacgtcgtcccccacaaaaa tcgggttcttctcttccggaatatggtcaccaaagagaaagagcagctgggcttggtggagaccagctctgcgtcacctc acgtcacccacatcacgatccgtcggtcccgcatgctggaggacggctacgagcagctgcgccagctctctcagaacgcc atgaagggcgtcatccgggtgaagtttgtgaacgacctgggcatggatgaagcgggcatcgaccaggatggcgtgttcaa ggagttcttggaggagatcatcaagaaggtctttgacccagcgctcaacctcttcaagaccaccagcggggacgagaggc tgtacccgtcccccaccgcttacatccacgagaacttcctgcagctctttgagtttgtcgggaagatgcttggaaaagct gtttatgagggaattgtggtggacgttccctttgcctcgttcttcctgagccagttgcttggccatcaccacagcatctt ctacagctcggtggacgagcttccctccttggactccgagttctataagaacctgacctccatcaagcgctacgaaggag acaccagcgacttgggcctaaccctctcctacgatgaagacgtgatgggccagctggtgtgccacgaactcattccagga ggaaagaccatccctgtgaccaacgagaacaagatcagctacatccacctgatggcccacttccgcatgcacacccagat caagaaccagacggccgctttcataagcgggttccggtccatcatcaagcccgagtggatccgtgtcttctccgcacctg agttgcagcggttgatatctggagacaatgccgagatcgacctggaggacttgaagaaacacaccgtctactacgggggc ttccatggcagccacagggtcatcctctggctctgggacatccttgcccacgatttcagccccgaggaaagagccatgtt tctcaagtttgttaccagttgctcccggccgccactcctgggcttcgtctacctcaagccccccttctccatccggtgcg tggaagtgtcggacgaccaggacacgggggacaccctgggcagcgttctgcggggcttcttcaccatccggaagaaggag ccgggggggcgcctgcccacctcctccacctgcttcaacctcctgaagctgcccaactacagcaagaagagcgtcctgag ggagaagctgcgctacgccatcagcatgaacacgggctttgagctctcgtagcagccctggcgggagagaagagaccggg accggctggccagacgagcagcgccttcccggggccctgggaactccggggccgtgcccaggtagacaaggagctgcctc cagcgctgcttaactcctctgagaccgcagctggcctgccattaaacgtagccttgcctgcaaacctt |
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Protein
| Protein ID | habu1_s399842_g24606.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24606.t1 MFSATQSSKAEFLDKARQAREERREQKEREQAAVRIQALVRRFLCRCRLQRKIRSEVDNFFHTSGPAKKTALSLFKISRK LLFIFKLPQDKERFEKLCRCILSSMEAENDPKVWYVSLALSKELTLLWIQQVKDVLWICCEFLKLLKPDILQDSKLVNLH LTMLVTFTDTSTWKILQGKGEALRHAMNHICANIMGHLNQKGFYSVLQRLAVMESQDLLRRFLLFLSREEQCRDVCVCLE GSHTLCLLGNLVYLGSLNEKVLQEETPHFVSVLTQTLCYCQKYVSQKKSNLTHWHPVLGWFSQTVDYGLNESMPLLTKQL QHLWGAHMIRILFSDVLSKKLLESQEAARQPPPASSPQSSLPVKSLFRRAFQKSTSVRNILKPIGGKRVDSAEVQKVCSI CVLYQMALTTLTQIRLQILTGLTYLDDLLPKLWALICELGPQGGLKVFLECLNNHTEESKRLLAMLTLFCDCSRHLITDL KPNLLFQELDKDRKRAQLVLQYIPHVVPHKNRVLLFRNMVTKEKEQLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQL SQNAMKGVIRVKFVNDLGMDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTAYIHENFLQLFEFVGKM LGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYEGDTSDLGLTLSYDEDVMGQLVCHE LIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAAFISGFRSIIKPEWIRVFSAPELQRLISGDNAEIDLEDLKKHTV YYGGFHGSHRVILWLWDILAHDFSPEERAMFLKFVTSCSRPPLLGFVYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTI RKKEPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS |
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