Gene
| Gene Model ID | habu1_s399842_g24608 |
|---|---|
| Locus | habu1_scaffold399842 : 1059201 ... 1083513 : + |
| To GenomeBrowser | habu1_scaffold399842:1059201..1083513 |
| Genes list of scaffold | habu1_scaffold399842 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mevalonate kinase isoform x1 | EC:2.7.1.36 GO:0004496 GO:0005524 GO:0005737 GO:0006694 GO:0008299 GO:0016310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s399842_g24608.t2 | 1 | 1 | GHMP_kinases_N | 131 | 213 | 3.2e-22 | 78.3 | 2.3e-25 | 8.6e-22 | 76.9 |
| habu1_s399842_g24608.t2 | 1 | 1 | GHMP_kinases_C | 291 | 359 | 8.3e-06 | 25.9 | 2.9e-09 | 1.1e-05 | 25.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.3 |
| Venom grand-1 | 2.9 |
| Pit, infrared sensing | 4.4 |
| Nose | 5.6 |
| Brain-1 | 3.8 |
| Eye | 4.2 |
| fetal fibroblast | 8.3 |
| venom gland-2 | 7.4 |
| Brain-2 | 4.7 |
| Spleen | 1.9 |
| Lung | 4.8 |
| Liver | 1.0 |
| Kidney | 4.1 |
| Pancreas | 3.0 |
| Small intestine | 1.6 |
| Large intestine | 3.2 |
| Stomach | 6.1 |
| heart | 3.0 |
| ovary | 9.6 |
| cheek muscle | 2.8 |
Transcript
| Transcript ID | habu1_s399842_g24608.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24608.t1 acgccccttcggaatgttcgcctcacctggagcggcggcagggacagggaggcgatgtggaagcggagcctggtggtttc cgccccggggaaggtgatcctgcacggcgagcatgccgtggtgcacgggaaggtggctctggcgactgccctggacttgc gaactttccttcggatgactccgcgccaggatgggaagctctccctgcagttgcctaacctcgggagcagatcgagctgg gaggctgctgagctccagcccctgctggcagcgctttcagctgaactatctgaagcgcagccgcccagcgccgaacaagt ggagaagctgaaagcgtttgcagggggcgataacggacacgaagcagtccagagtgtagctgctgcagcctttctttatt tgtacttatctgtggcatctaaatatggggttctgccatctgtcgacatcttggtctggtctgagctgcccactggcgct gggttaggctccagtgcggcgtattcggtctgcctggcaggggccttgctttctggatgcggcgccatcagctatcctct gcaggaggaccaagaagtagctagatggaccgaggaggagctggacatgatcaacagattggccttccgaggagagcaag tgatccacgggaatccttctggagtggacaatgctgtgagcacatggggtggagccttgcggtatatttcaggaaaaatc tctgcactgaaaagggtgcccactttacggattttactgactaacactaaagttccacgcagcaccaagatcctggttgc cggggttaaagacaagctcctgaagtttcccactatcatggagccgatgctcatttccatagatgcaatttctcgggaat gcgaaggtattcttgaggcaatgactgaagagccattgcaggaacactactccaggctggaggacttggtggacatcaac cagcatctcctcaatggcatcggggtcggccactccctgctggaccgcgtctgccaggtcacttcctcccatgggctgca tagcaaactgacgggggctgggggaggcggctgtgccattactttgctgcgaccaggcaccactccttcggcagtggaag gcgccatccgagacctgacccgctgcgggtttgagtgctgggagacgctgcctgggactccagagcacaatgccccaaga cggacacccccccgccggccctttggctcccccagatgcgagatctccgtactcctgcataagccagagccggccggctc cccaggcagagaaccccttgtcattaaaaccggatctccgctgcagctgctgcttggagcccagaatcgctggcgtcttg gaagcaaggccagctcagatccgactcccagctgggactcctctgccatgggaaccccatccatttagaccgaaactgac agaggagggcctcacctgtgaaatgaacctgcatcgt |
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| Transcript ID | habu1_s399842_g24608.t2 |
| Definition | - |
>habu1_s399842_g24608.t2 acgccccttcggaatgttcgcctcacctggagcggcggcagggacaggtgagggtctcctcgccggcccagcatgcattg cgcggaaagacccccccccacctccacccccgagggggaaagggaggcgatgtggaagcggagcctggtggtttccgccc cggggaaggtgatcctgcacggcgagcatgccgtggtgcacgggaaggtggctctggcgactgccctggacttgcgaact ttccttcggatgactccgcgccaggatgggaagctctccctgcagttgcctaacctcgggagcagatcgagctgggaggc tgctgagctccagcccctgctggcagcgctttcagctgaactatctgaagcgcagccgcccagcgccgaacaagtggaga agctgaaagcgtttgcagggggcgataacggacacgaagcagtccagagtgtagctgctgcagcctttctttatttgtac ttatctgtggcatctaaatatggggttctgccatctgtcgacatcttggtctggtctgagctgcccactggcgctgggtt aggctccagtgcggcgtattcggtctgcctggcaggggccttgctttctggatgcggcgccatcagctatcctctgcagg aggaccaagaagtagctagatggaccgaggaggagctggacatgatcaacagattggccttccgaggagagcaagtgatc cacgggaatccttctggagtggacaatgctgtgagcacatggggtggagccttgcggtatatttcaggaaaaatctctgc actgaaaagggtgcccactttacggattttactgactaacactaaagttccacgcagcaccaagatcctggttgccgggg ttaaagacaagctcctgaagtttcccactatcatggagccgatgctcatttccatagatgcaatttctcgggaatgcgaa ggtattcttgaggcaatgactgaagagccattgcaggaacactactccaggctggaggacttggtggacatcaaccagca tctcctcaatggcatcggggtcggccactccctgctggaccgcgtctgccaggtcacttcctcccatgggctgcatagca aactgacgggggctgggggaggcggctgtgccattactttgctgcgaccaggcaccactccttcggcagtggaaggcgcc atccgagacctgacccgctgcgggtttgagtgctgggagacgctgcctgggactccagagcacaatgccccaagacggac acccccccgccggccctttggctcccccagatgcgagatctccgtactcctgcataagccagagccggccggctccccag gcagagaaccccttgtcattaaaaccggatctccgctgcagctgctgcttggagcccagaatcgctggcgtcttggaagc aaggccagctcagatccgactcccagctgggactcctctgccatgggaaccccatccatttagaccgaaactgacagagg agggcctcacctgtgaaatgaacctgcatcgt |
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Protein
| Protein ID | habu1_s399842_g24608.t1 |
|---|---|
| Definition | - |
>habu1_s399842_g24608.t1 MWKRSLVVSAPGKVILHGEHAVVHGKVALATALDLRTFLRMTPRQDGKLSLQLPNLGSRSSWEAAELQPLLAALSAELSE AQPPSAEQVEKLKAFAGGDNGHEAVQSVAAAAFLYLYLSVASKYGVLPSVDILVWSELPTGAGLGSSAAYSVCLAGALLS GCGAISYPLQEDQEVARWTEEELDMINRLAFRGEQVIHGNPSGVDNAVSTWGGALRYISGKISALKRVPTLRILLTNTKV PRSTKILVAGVKDKLLKFPTIMEPMLISIDAISRECEGILEAMTEEPLQEHYSRLEDLVDINQHLLNGIGVGHSLLDRVC QVTSSHGLHSKLTGAGGGGCAITLLRPGTTPSAVEGAIRDLTRCGFECWETLPGTPEHNAPRRTPPRRPFGSPRCEISVL LHKPEPAGSPGREPLVIKTGSPLQLLLGAQNRWRLGSKASSDPTPSWDSSAMGTPSI |
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| Protein ID | habu1_s399842_g24608.t2 |
| Definition | - |
>habu1_s399842_g24608.t2 MWKRSLVVSAPGKVILHGEHAVVHGKVALATALDLRTFLRMTPRQDGKLSLQLPNLGSRSSWEAAELQPLLAALSAELSE AQPPSAEQVEKLKAFAGGDNGHEAVQSVAAAAFLYLYLSVASKYGVLPSVDILVWSELPTGAGLGSSAAYSVCLAGALLS GCGAISYPLQEDQEVARWTEEELDMINRLAFRGEQVIHGNPSGVDNAVSTWGGALRYISGKISALKRVPTLRILLTNTKV PRSTKILVAGVKDKLLKFPTIMEPMLISIDAISRECEGILEAMTEEPLQEHYSRLEDLVDINQHLLNGIGVGHSLLDRVC QVTSSHGLHSKLTGAGGGGCAITLLRPGTTPSAVEGAIRDLTRCGFECWETLPGTPEHNAPRRTPPRRPFGSPRCEISVL LHKPEPAGSPGREPLVIKTGSPLQLLLGAQNRWRLGSKASSDPTPSWDSSAMGTPSI |
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